RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 NANOGP8Q6NSW7 305 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 C1orf94Q6P1W5 598 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 ZNF621Q6ZSS3 439 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 THOC6Q86W42 341 aaKnown RBP1.78□□□□□ -2.12
CCDC66-221ENST00000487739 ACOT4Q8N9L9 421 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 MFSD9Q8NBP5 474 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 IPMKQ8NFU5 416 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 FAM110BQ8TC76 370 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 SMARCD2Q92925 531 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 UBE2E3Q969T4 207 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 ULBP2Q9BZM5 246 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 CLMPQ9H6B4 373 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 SIAEQ9HAT2 523 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 ZFP14Q9HCL3 533 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 SIRT7Q9NRC8 400 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 QPCTLQ9NXS2 382 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 SLC25A37Q9NYZ2 338 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 TRAPPC4Q9Y296 219 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 ATP6V0A2Q9Y487 856 aa1.78□□□□□ -2.12
CCDC66-221ENST00000487739 PCM1Q15154 2024 aa1.78□□□□□ -2.13
CCDC66-221ENST00000487739 A8MXQ7 604 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 LOC110117498-PIK3R3F6TDL0 507 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 HSD17B6O14756 317 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 NDC80O14777 642 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 MED7O43513 233 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 RAMP3O60896 148 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 SNNO75324 88 aaPredicted RBP1.77□□□□□ -2.13
CCDC66-221ENST00000487739 HSMCR30P0CW71 290 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 CCR1P32246 355 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 IFNAR2P48551 515 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 MEF2BQ02080 365 aaPredicted RBP1.77□□□□□ -2.13
CCDC66-221ENST00000487739 ACVR1Q04771 509 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 ENPEPQ07075 957 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 ASPHQ12797 758 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 KIAA0087Q14695 138 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 DPYSL2Q16555 572 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 SFT2D3Q587I9 215 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 CFAP157Q5JU67 520 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 LCN12Q6JVE5 192 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 UQCC3Q6UW78 93 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 ECHDC2Q86YB7 292 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 PCP2Q8IVA1 136 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 FAM133AQ8N9E0 248 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 RLN3Q8WXF3 142 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 RSPH1Q8WYR4 309 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 UFD1Q92890 307 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 EXOSC8Q96B26 276 aaKnown RBP1.77□□□□□ -2.13
CCDC66-221ENST00000487739 CXorf40BQ96DE9 158 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 TAAR1Q96RJ0 339 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 CLCC1Q96S66 551 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 TMEM246Q9BRR3 403 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 CDC42EP4Q9H3Q1 356 aaKnown RBP1.77□□□□□ -2.13
CCDC66-221ENST00000487739 YY1AP1Q9H869 796 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 KCNIP1Q9NZI2 227 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 MMP17Q9ULZ9 603 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 HEBP2Q9Y5Z4 205 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 SLC25A15Q9Y619 301 aa1.77□□□□□ -2.13
CCDC66-221ENST00000487739 TET2Q6N021 2002 aaPredicted RBP1.77□□□□□ -2.13
CCDC66-221ENST00000487739 PLA2R1Q13018 1463 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 C17orf51A8MQB3 221 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 C12orf77C9JDV5 145 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 H0YCG3 227 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 MAGEB3O15480 346 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 PRKAB2O43741 272 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 GMFGO60234 142 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 RCBTB2O95199 551 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 NPY1RP25929 384 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 OR5I1Q13606 314 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 PRSS8Q16651 343 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 RSPO1Q2MKA7 263 aaPredicted RBP1.76□□□□□ -2.13
CCDC66-221ENST00000487739 LRRC10Q5BKY1 277 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 PDZK1Q5T2W1 519 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 ATAD3BQ5T9A4 648 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 FRMPD2BQ6IN97 320 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 BRD3OSQ6XYD6 125 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 Q6ZR03 302 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 NEGR1Q7Z3B1 354 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 DHDDSQ86SQ9 333 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 ZNF546Q86UE3 836 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 TEX9Q8N6V9 391 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 SCFD1Q8WVM8 642 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 TM4SF19Q96DZ7 209 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 RBM14Q96PK6 669 aaKnown RBP1.76□□□□□ -2.13
CCDC66-221ENST00000487739 MTMR9Q96QG7 549 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 CAPS2Q9BXY5 557 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 DEFB127Q9H1M4 99 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 SRMSQ9H3Y6 488 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 GORASP2Q9H8Y8 452 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 NHEJ1Q9H9Q4 299 aaPredicted RBP1.76□□□□□ -2.13
CCDC66-221ENST00000487739 KCNIP3Q9Y2W7 256 aa1.76□□□□□ -2.13
CCDC66-221ENST00000487739 DOCK9Q9BZ29 2069 aa1.75□□□□□ -2.13
CCDC66-221ENST00000487739 IGLV11-55A0A075B6I3 123 aa1.75□□□□□ -2.13
CCDC66-221ENST00000487739 IGLV3-22A0A075B6J6 115 aa1.75□□□□□ -2.13
CCDC66-221ENST00000487739 TRAV26-1A0A087WT03 109 aa1.75□□□□□ -2.13
CCDC66-221ENST00000487739 MTX2O75431 263 aa1.75□□□□□ -2.13
CCDC66-221ENST00000487739 ALDOBP05062 364 aa1.75□□□□□ -2.13
CCDC66-221ENST00000487739 TDGF1P13385 188 aa1.75□□□□□ -2.13
CCDC66-221ENST00000487739 POU2F1P14859 743 aa1.75□□□□□ -2.13
CCDC66-221ENST00000487739 DUSP3P51452 185 aaPredicted RBP1.75□□□□□ -2.13
CCDC66-221ENST00000487739 TDGF1P3P51864 188 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms