RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 LRP11Q86VZ4 500 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 OR51F2Q8NH61 342 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 SGMS2Q8NHU3 365 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 FAM216AQ8WUB2 273 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 GCDHQ92947 438 aaPredicted RBP16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 YIPF5Q969M3 257 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 TAAR8Q969N4 342 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZNF75AQ96N20 296 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 ARMC7Q9H6L4 198 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZNF275Q9NSD4 429 aaPredicted RBP16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 MYEF2Q9P2K5 600 aaKnown RBP16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 PCDHB10Q9UN67 800 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZNF232Q9UNY5 417 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 GPR45Q9Y5Y3 372 aa16.7■□□□□ 0.26
SMPDL3A-202ENST00000487215 SDHDO14521 159 aa16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 GRPRP30550 384 aa16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 PIGFQ07326 219 aa16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 TRMT5Q32P41 509 aaKnown RBP16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 FAM69AQ5T7M9 428 aa16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 CARD17Q5XLA6 110 aa16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 PEG10Q86TG7 708 aaKnown RBP16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 C20orf196Q8IYI0 205 aa16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZBTB18Q99592 522 aa16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 CENPHQ9H3R5 247 aa16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 CACYBPQ9HB71 228 aaKnown RBP16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 KCNK9Q9NPC2 374 aa16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 IFT52Q9Y366 437 aa16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 NOX1Q9Y5S8 564 aa16.69■□□□□ 0.26
SMPDL3A-202ENST00000487215 A0A0G2JPF8 293 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 LOC102725191A0A1B0GVB3 256 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 HNRNPCL2B2RXH8 293 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 HNRNPCL3B7ZW38 293 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 KCNAB3O43448 404 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 OR2T1O43869 369 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 HNRNPCL1O60812 293 aaKnown RBP16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 NCR1O76036 304 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 HNRNPCL4P0DMR1 293 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 BGNP21810 368 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 CBLP22681 906 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 TMEM33P57088 247 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 LMO4P61968 165 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 FXNQ16595 210 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 GTDC1Q4AE62 458 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZNF311Q5JNZ3 666 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 REP15Q6BDI9 236 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 FAHD2BQ6P2I3 314 aaPredicted RBP16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZNF813Q6ZN06 617 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 C1orf229Q6ZS94 237 aaPredicted RBP16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 USP43Q70EL4 1123 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 H1FNTQ75WM6 255 aaPredicted RBP16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 GLB1L3Q8NCI6 653 aaPredicted RBP16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 SLC38A4Q969I6 547 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 SLC35B4Q969S0 331 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 FAHD2AQ96GK7 314 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 EMC6Q9BV81 110 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 TPT1P8Q9HAU6 139 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 C12orf10Q9HB07 376 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZNF224Q9NZL3 707 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 FZR1Q9UM11 496 aa16.68■□□□□ 0.26
SMPDL3A-202ENST00000487215 IGKV1D-42A0A075B6H8 117 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 TRAV20A0A0B4J274 112 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 TRIM77I1YAP6 450 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 PPIHO43447 177 aaKnown RBP16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 RP2O75695 350 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 PNPP00491 289 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 HPRP00739 348 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 HLA-DOBP13765 273 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 EPHA1P21709 976 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 PTDSS1P48651 473 aaKnown RBP16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 ARFIP2P53365 341 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 MRPS11P82912 194 aaKnown RBP16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 GKAP1Q5VSY0 366 aaPredicted RBP16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 C5orf46Q6UWT4 87 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZNF627Q7L945 461 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 UEVLDQ8IX04 471 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 ADPRHL1Q8NDY3 354 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 VPS33AQ96AX1 596 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 RBM4Q9BWF3 364 aaKnown RBP16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 PARD6BQ9BYG5 372 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 KLHL14Q9P2G3 628 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 RPS6KB2Q9UBS0 482 aa16.67■□□□□ 0.26
SMPDL3A-202ENST00000487215 TRAV36DV7A0A075B6V5 113 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 LOC105371242A0A075B767 164 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 MS4A18H0YCH9 400 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 ANP32DO95626 131 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 AVPP01185 164 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 IL6P05231 212 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 ZCCHC18P0CG32 403 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 NAT2P11245 290 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 B4GALT1P15291 398 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 GIPRP48546 466 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 AQP5P55064 265 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 RPS23P62266 143 aaKnown RBP16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 GALK2Q01415 458 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 MFSD13AQ14CX5 517 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 MS4A18Q3C1V0 323 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 CEP85LQ5SZL2 805 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 HHATQ5VTY9 493 aa16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 NET1Q7Z628 596 aaPredicted RBP16.66■□□□□ 0.26
SMPDL3A-202ENST00000487215 WDFY1Q8IWB7 410 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms