RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 OR4K15Q8NH41 348 aa12.31□□□□□ -0.44
HDLBP-241ENST00000487169 IFI44Q8TCB0 444 aa12.31□□□□□ -0.44
HDLBP-241ENST00000487169 ARSGQ96EG1 525 aa12.31□□□□□ -0.44
HDLBP-241ENST00000487169 C19orf43Q9BQ61 176 aa12.31□□□□□ -0.44
HDLBP-241ENST00000487169 KLK4Q9Y5K2 254 aa12.31□□□□□ -0.44
HDLBP-241ENST00000487169 CDHR4A6H8M9 788 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 HMGN4O00479 90 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 EIF4E2O60573 245 aaKnown RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 IFNA2P01563 188 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 RAB40ALP0C0E4 278 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 SNRPBP14678 240 aaKnown RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 NR4A2P43354 598 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 PLK5Q496M5 336 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 EXOSC6Q5RKV6 272 aaKnown RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 BHLHA9Q7RTU4 235 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 ZNF695Q8IW36 515 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 RAB40AQ8WXH6 277 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 RASD2Q96D21 266 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 LINC00615Q96LM1 132 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 VRK1Q99986 396 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 TEX101Q9BY14 249 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 WDR76Q9H967 626 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 PCDHGA1Q9Y5H4 931 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 TMEM212A6NML5 194 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 PRKNO60260 465 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 GAAP10253 952 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 SHC1P29353 583 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 GPR157Q5UAW9 335 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 METAP1DQ6UB28 335 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 ZNF285Q96NJ3 590 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 EMC6Q9BV81 110 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 IKZF5Q9H5V7 419 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 NOX4Q9NPH5 578 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 SEMA4GQ9NTN9 838 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 ZFP57Q9NU63 452 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 SNX11Q9Y5W9 270 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 A0A1B0GV50 99 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 FXYD1O00168 92 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 SBK3P0C264 359 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 IL2RGP31785 369 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 IL13RA1P78552 427 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 LIMS2Q7Z4I7 341 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 RSPRY1Q96DX4 576 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 ELMOD3Q96FG2 381 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 PRRT1Q99946 306 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 OR14J1Q9UGF5 321 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 RCE1Q9Y256 329 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 LSM5Q9Y4Y9 91 aaKnown RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 PCM1Q15154 2024 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 GAPDHSO14556 408 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 CBX7O95931 251 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 TP53P04637 393 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 CDK2P24941 298 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 HTR1FP30939 366 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 HTRA4P83105 476 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 MPEG1Q2M385 716 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 KDM4DQ6B0I6 523 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 H1FNTQ75WM6 255 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 ZNF454Q8N9F8 522 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 BEST4Q8NFU0 473 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 THOC3Q96J01 351 aaKnown RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 CHST8Q9H2A9 424 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 ACER3Q9NUN7 267 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 B3GNT2Q9NY97 397 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 SERGEFQ9UGK8 458 aa12.3□□□□□ -0.44
HDLBP-241ENST00000487169 INTS1Q8N201 2190 aaKnown RBP12.3□□□□□ -0.44
HDLBP-241ENST00000487169 TFP02787 698 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 S100A2P29034 98 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 BSGP35613 385 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 PPICP45877 212 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 CX3CR1P49238 355 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 RPS25P62851 125 aaKnown RBP12.29□□□□□ -0.44
HDLBP-241ENST00000487169 YOD1Q5VVQ6 348 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-241ENST00000487169 HBMQ6B0K9 141 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 SYT13Q7L8C5 426 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 C16orf52Q8NHV5 167 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 SLC25A43Q8WUT9 341 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-241ENST00000487169 MUL1Q969V5 352 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 MVB12AQ96EY5 273 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 CENPOQ9BU64 300 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 SEMA4CQ9C0C4 833 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 NIPAL2Q9H841 368 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 DUSP13Q9UII6 198 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 ZNF223Q9UK11 482 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-241ENST00000487169 PCDHB10Q9UN67 800 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 DIMT1Q9UNQ2 313 aaKnown RBP12.29□□□□□ -0.44
HDLBP-241ENST00000487169 MED16Q9Y2X0 877 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 OR51B4Q9Y5P0 310 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 SSC5DA1L4H1 1573 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 AKR7A3O95154 331 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 SLC34A2O95436 690 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 OLFM2O95897 454 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 EPHA1P21709 976 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 Q499Y3 187 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 SAXO2Q658L1 398 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 STEAP2Q8NFT2 490 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 PSMF1Q92530 271 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 SORCS2Q96PQ0 1159 aa12.29□□□□□ -0.44
HDLBP-241ENST00000487169 CMSS1Q9BQ75 279 aaKnown RBP12.29□□□□□ -0.44
HDLBP-241ENST00000487169 OR2B2Q9GZK3 357 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms