RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SMARCD2Q92925 531 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 MS4A4EQ96PG1 132 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 OR8B4Q96RC9 309 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 NRTNQ99748 197 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 CCDC94Q9BW85 323 aaPredicted RBP2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 SRMSQ9H3Y6 488 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 MRPL47Q9HD33 250 aaKnown RBP2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 ETNK2Q9NVF9 386 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 CLCF1Q9UBD9 225 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 SLC25A15Q9Y619 301 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 IGLV3-22A0A075B6J6 115 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 A0A0G2JN53 185 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 WI2-2373I1.2A0A1W2PRP0 233 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 CCDC169A6NNP5 214 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 PANO1I0J062 215 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 PSTPIP1O43586 416 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 UPK3AO75631 287 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 C1orf105O95561 183 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 INSP01308 110 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 IGHV4-34P06331 123 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 GIPP09681 153 aaPredicted RBP2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 UQCRFS1P1P0C7P4 283 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 UBTFL1P0CB47 393 aaPredicted RBP2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 NEFHP12036 1026 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 ZNF17P17021 662 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 TCN1P20061 433 aaPredicted RBP2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 KITLGP21583 273 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 SLC2A5P22732 501 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 CASP14P31944 242 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 NUDT1P36639 197 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 SUCLG1P53597 346 aaKnown RBP2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 PLP1P60201 277 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 ACVR1Q04771 509 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 PDIA2Q13087 525 aaKnown RBP2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 PPIL2Q13356 520 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 KIAA0087Q14695 138 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 CCDC183Q5T5S1 534 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 TRIM40Q6P9F5 258 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 ZYG11AQ6WRX3 759 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 KDM7AQ6ZMT4 941 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 ACP7Q6ZNF0 438 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 SLC25A48Q6ZT89 311 aaKnown RBP2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 FAM228AQ86W67 206 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 TMEM61Q8N0U2 210 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 PDCL2Q8N4E4 241 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 FAM71E2Q8N5Q1 922 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 VN1R2Q8NFZ6 395 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 OR2L3Q8NG85 312 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 NDRG1Q92597 394 aaKnown RBP2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 RDH5Q92781 318 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 STMN2Q93045 179 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 CYYR1Q96J86 154 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 SORT1Q99523 831 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 DEFB127Q9H1M4 99 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 NXF3Q9H4D5 531 aaKnown RBP2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 ADAP2Q9NPF8 381 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 CCL28Q9NRJ3 127 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 EXD2Q9NVH0 621 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 KLHL28Q9NXS3 571 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 SLC2A8Q9NY64 477 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 CALYQ9NYX4 217 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 SPATA7Q9P0W8 599 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 ZNF225Q9UK10 706 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 CDHR2Q9BYE9 1310 aa2.37□□□□□ -2.03
SNRNP27-204ENST00000487029 COL16A1Q07092 1604 aaPredicted RBP2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 KIR2DL5BA0A0G2JN68 375 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 KIR2DL5BA0A0G2JPC4 375 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 PINLYPA6NC86 204 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 FAM47DPA6NHR8 397 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 AP3B1O00203 1094 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 MGRN1O60291 552 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 CIB2O75838 187 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 TNFSF13O75888 250 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 ERLIN2O94905 339 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 IGHV2-5P01817 119 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 KRT6AP02538 564 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 C2P06681 752 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 NR2C1P13056 603 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 HPGDP15428 266 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 CRISP2P16562 243 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 BTCP35070 178 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 ATP5C1P36542 298 aaKnown RBP2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 KCNJ2P63252 427 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 CKAP4Q07065 602 aaKnown RBP2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 UNC119Q13432 240 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 LRRC10Q5BKY1 277 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 COX15Q7KZN9 410 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 KIR2DL5AQ8N109 375 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 OR10G9Q8NGN4 311 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 OR1N2Q8NGR9 330 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 KIR2DL5BQ8NHK3 375 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 KCNG3Q8TAE7 436 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 RNF138Q8WVD3 245 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 CNDP1Q96KN2 507 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 HSFY1Q96LI6 401 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 OR2M2Q96R28 347 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 PLIN2Q99541 437 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 HES7Q9BYE0 225 aa2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 EML4Q9HC35 981 aaKnown RBP2.36□□□□□ -2.03
SNRNP27-204ENST00000487029 ZFP14Q9HCL3 533 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms