RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PCDH7O60245 1069 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 SS18L1O75177 396 aaPredicted RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 NME6O75414 186 aaPredicted RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 ACTL6BO94805 426 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 OR4F21O95013 312 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 PSMG1O95456 288 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 APOHP02749 345 aaPredicted RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 IL3P08700 152 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 IFI6P09912 130 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 PSMB1P20618 241 aaKnown RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 PHBP35232 272 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 HSD17B3P37058 310 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 MAGEA12P43365 314 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 SERPINB9P50453 376 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 PSMD4P55036 377 aaKnown RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 CDH13P55290 713 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 TPD52P55327 224 aaPredicted RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 CTBP2P56545 445 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 RPS4XP62701 263 aaKnown RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 SLC18A2Q05940 514 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 DMTNQ08495 405 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 C17orf67Q0P5P2 114 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 RASA2Q15283 850 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 TRADDQ15628 312 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNHIT3Q15649 155 aaPredicted RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 UAP1Q16222 522 aaPredicted RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 CLEC12BQ2HXU8 276 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 EXOC3L2Q2M3D2 409 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 SPIN4Q56A73 249 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 RAET1LQ5VY80 246 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 ACSM2BQ68CK6 577 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 DNM1P46Q6ZS02 220 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 FOXL2NBQ6ZUU3 175 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 MARCH3Q86UD3 253 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 HIPK1Q86Z02 1210 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 FAM9CQ8IZT9 166 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 OR2L13Q8N349 312 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 GTPBP8Q8N3Z3 284 aaPredicted RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 SETD9Q8NE22 299 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 STEAP2Q8NFT2 490 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 OR7G2Q8NG99 324 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 OR5M1Q8NGP8 315 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 C16orf78Q8WTQ4 265 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 TMEM158Q8WZ71 300 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 C11orf24Q96F05 449 aaPredicted RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 PKNOX2Q96KN3 472 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 BBS4Q96RK4 519 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 FUT8Q9BYC5 575 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 REG4Q9BYZ8 158 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 PRRG4Q9BZD6 226 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 RTN4RQ9BZR6 473 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 ACTR6Q9GZN1 396 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 C3orf14Q9HBI5 128 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 NGBQ9NPG2 151 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 SENP1Q9P0U3 644 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 MCTS1Q9ULC4 181 aaKnown RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 GRID1Q9ULK0 1009 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 C19orf53Q9UNZ5 99 aaPredicted RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 WBP11Q9Y2W2 641 aaKnown RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 MMP24Q9Y5R2 645 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 SNX8Q9Y5X2 465 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 ARFGEF3Q5TH69 2177 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 IGHV4OR15-8A0A075B7B6 117 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 UQCRHLA0A096LP55 91 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 A8MT66 165 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 UPK1AO00322 258 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 CXCL13O43927 109 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 GCM2O75603 506 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 SUPT7LO94864 414 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 UTS2O95399 124 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 SYNGR4O95473 234 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ANGPTL1O95841 491 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 TUBBP07437 444 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 SOD3P08294 240 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 INHBAP08476 426 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ANXA4P09525 319 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 CSF1P09603 554 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 DANCRP0C864 163 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 PABPC4LP0CB38 370 aaKnown RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF17P17021 662 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 TSPAN8P19075 237 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 TAC1P20366 129 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 IMPDH1P20839 514 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 PSMA4P25789 261 aaKnown RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 LCN1P31025 176 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 TIA1P31483 386 aaKnown RBP eCLIP3.47□□□□□ -1.857e-14■■■■□ 21.6
SNRNP40-205ENST00000486941 GABRA3P34903 492 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 RPL3P39023 403 aaKnown RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 MAP3K8P41279 467 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 SLC6A8P48029 635 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 RPS6KA3P51812 740 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 FUT6P51993 359 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 NCBP2P52298 156 aaKnown RBP eCLIP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 PKNOX1P55347 436 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 C2orf54Q08AI8 447 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF763Q0D2J5 394 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 C2orf80Q0P641 193 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF155Q12901 538 aaPredicted RBP3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 STX5Q13190 355 aa3.47□□□□□ -1.85
SNRNP40-205ENST00000486941 VEZF1Q14119 521 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms