RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 AKR7A3O95154 331 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 GLULP15104 373 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 FXYD6P3P58550 94 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 TEKQ02763 1124 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 TPBGQ13641 420 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 RAB11BQ15907 218 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 OR1L3Q8NH93 324 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 SETD6Q8TBK2 473 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 NAT6Q93015 286 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 SLC25A44Q96H78 314 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-216ENST00000486741 PGAM5Q96HS1 289 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 ENKD1Q9H0I2 346 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 SLC39A1Q9NY26 324 aa12.1□□□□□ -0.47
HMGN1-216ENST00000486741 ALOX12BO75342 701 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 LIPCP11150 499 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 GLB1P16278 677 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 PRKACAP17612 351 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 CRABP1P29762 137 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 CRYBB2P43320 205 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 HSF2Q03933 536 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 MAN2C1Q9NTJ4 1040 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 C5orf51A6NDU8 294 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 SYT7O43581 403 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 SSX4O60224 188 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 GPANK1O95872 356 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 ECDO95905 644 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-216ENST00000486741 SLC2A5P22732 501 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 PCGF3Q3KNV8 242 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 GPR139Q6DWJ6 353 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 FAM199XQ6PEV8 388 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-216ENST00000486741 CORO6Q6QEF8 472 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 KCTD9Q7L273 389 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 GCDHQ92947 438 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-216ENST00000486741 KTI12Q96EK9 354 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-216ENST00000486741 NOP16Q9Y3C1 178 aaKnown RBP12.09□□□□□ -0.47
HMGN1-216ENST00000486741 RBM7Q9Y580 266 aaKnown RBP12.09□□□□□ -0.47
HMGN1-216ENST00000486741 SLCO1B1Q9Y6L6 691 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 TRAV36DV7A0A075B6V5 113 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 BLACEA4D250 179 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF878C9JN71 531 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 E9PI62 339 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 CRYZL1O95825 349 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 SLC2A1P11166 492 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 STARP49675 285 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 GPLD1P80108 840 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 RASGEF1BQ0VAM2 473 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 SF3A2Q15428 464 aaKnown RBP12.09□□□□□ -0.47
HMGN1-216ENST00000486741 DMRTC1Q5HYR2 192 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 C1orf140Q5VVS0 124 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 QSOX2Q6ZRP7 698 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 NDUFAF7Q7L592 441 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 MFSD4AQ8N468 514 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 AGBL5Q8NDL9 886 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 OR7G1Q8NGA0 311 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 RNASE11Q8TAA1 199 aaKnown RBP12.09□□□□□ -0.47
HMGN1-216ENST00000486741 MSANTD3Q96H12 275 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 AICDAQ9GZX7 198 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 S1PR5Q9H228 398 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 GALNT9Q9HCQ5 603 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 FGF20Q9NP95 211 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-216ENST00000486741 TBC1D24Q9ULP9 559 aa12.09□□□□□ -0.47
HMGN1-216ENST00000486741 SMLR1H3BR10 107 aa12.08□□□□□ -0.47
HMGN1-216ENST00000486741 CYB5AP00167 134 aa12.08□□□□□ -0.47
HMGN1-216ENST00000486741 P04436 131 aa12.08□□□□□ -0.47
HMGN1-216ENST00000486741 APEHP13798 732 aaKnown RBP12.08□□□□□ -0.47
HMGN1-216ENST00000486741 ITGA3P26006 1051 aa12.08□□□□□ -0.47
HMGN1-216ENST00000486741 POLR2HP52434 150 aaKnown RBP12.08□□□□□ -0.47
HMGN1-216ENST00000486741 EFR3AQ14156 821 aa12.08□□□□□ -0.47
HMGN1-216ENST00000486741 NKAPLQ5M9Q1 402 aa12.08□□□□□ -0.47
HMGN1-216ENST00000486741 DEFB123Q8N688 67 aa12.08□□□□□ -0.47
HMGN1-216ENST00000486741 PNLDC1Q8NA58 520 aaKnown RBP12.08□□□□□ -0.47
HMGN1-216ENST00000486741 SLC35B4Q969S0 331 aa12.08□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF578Q96N58 590 aaPredicted RBP12.08□□□□□ -0.47
HMGN1-216ENST00000486741 ABI3Q9P2A4 366 aa12.08□□□□□ -0.47
HMGN1-216ENST00000486741 PLEKHA6Q9Y2H5 1048 aa12.08□□□□□ -0.47
HMGN1-216ENST00000486741 DOCK9Q9BZ29 2069 aa12.08□□□□□ -0.47
HMGN1-216ENST00000486741 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 A0A0B4J2E0 115 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 C13orf42A0A1B0GVH6 325 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 A0A1B0GX12 115 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 A0A1W2PNR3 127 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 H0YIG0 161 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 HOXC4P09017 264 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-216ENST00000486741 DNASE1P24855 282 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 BIDP55957 195 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 CCINQ13939 588 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 ACKR1Q16570 336 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 GUSBP11Q6P575 273 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 GIMAP5Q96F15 307 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 MED29Q9NX70 200 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 DNAJB12Q9NXW2 375 aaKnown RBP12.08□□□□□ -0.48
HMGN1-216ENST00000486741 FLRT3Q9NZU0 649 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 COA3Q9Y2R0 106 aaPredicted RBP12.08□□□□□ -0.48
HMGN1-216ENST00000486741 IGHV1OR21-1A0A087WYE8 117 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 NSG1A0A0A6YYJ2 146 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 GLCEO94923 617 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 SEMG1P04279 462 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 CASRP41180 1078 aa12.08□□□□□ -0.48
HMGN1-216ENST00000486741 RPS15P62841 145 aaKnown RBP12.08□□□□□ -0.48
HMGN1-216ENST00000486741 ZNF486Q96H40 463 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms