RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 SH3BGRL2Q9UJC5 107 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 CLEC4AQ9UMR7 237 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 ADGRG4Q8IZF6 3080 aa11.37□□□□□ -0.59
HDAC6-229ENST00000486665 KIAA1549Q9HCM3 1950 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 FIGNL2A6NMB9 653 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 SERPINI2O75830 405 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 TOXO94900 526 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 SNAP29O95721 258 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 PLGP00747 810 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-229ENST00000486665 HOXD4P09016 255 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-229ENST00000486665 GLI4P10075 376 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 GRNP28799 593 aaKnown RBP11.36□□□□□ -0.59
HDAC6-229ENST00000486665 NTF4P34130 210 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 PTGER4P35408 488 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 CRISP1P54107 249 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 PRPS1P60891 318 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 ERVK-25P63136 954 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 SF3B4Q15427 424 aaKnown RBP eCLIP11.36□□□□□ -0.594e-7■■■■■ 29.8
HDAC6-229ENST00000486665 ANKDD1AQ495B1 522 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 CLEC12AQ5QGZ9 265 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 TMEM236Q5W0B7 351 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 ACSM5Q6NUN0 579 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 CREB3L2Q70SY1 520 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 PXKQ7Z7A4 578 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 SLC43A2Q8N370 569 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 MARVELD2Q8N4S9 558 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 IQCF1Q8N6M8 205 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 PACRGLQ8N7B6 248 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 OR4Q3Q8NH05 313 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 SF3B5Q9BWJ5 86 aaKnown RBP11.36□□□□□ -0.59
HDAC6-229ENST00000486665 TSSK6Q9BXA6 273 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 TP63Q9H3D4 680 aaPredicted RBP11.36□□□□□ -0.59
HDAC6-229ENST00000486665 TOR3AQ9H497 397 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 RIBC2Q9H4K1 309 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 RNF122Q9H9V4 155 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 INIPQ9NRY2 104 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 POLQO75417 2590 aa11.36□□□□□ -0.59
HDAC6-229ENST00000486665 IGKV3D-15A0A087WSY6 115 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 TRGV8A0A0C4DH27 118 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 MBD3L4A6NDZ8 208 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-229ENST00000486665 MBD3L3A6NE82 208 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-229ENST00000486665 MBD3L5A6NJ08 208 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-229ENST00000486665 E9PQ18 207 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 H3BN98 237 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 TRAF3IP2O43734 574 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-229ENST00000486665 VAMP5O95183 116 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 PPP1R3DO95685 299 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 CD14P08571 375 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 IFNGR1P15260 489 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 SLC6A6P31641 620 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 RPL4P36578 427 aaKnown RBP11.35□□□□□ -0.59
HDAC6-229ENST00000486665 GIPRP48546 466 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 SLC16A1P53985 500 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 ESRRGP62508 458 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 CDK5Q00535 292 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 NPRL3Q12980 569 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 GINS1Q14691 196 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 PDK3Q15120 406 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 POU4F3Q15319 338 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 SNCBQ16143 134 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 ACKR1Q16570 336 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 SP5Q6BEB4 398 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-229ENST00000486665 B3GNT6Q6ZMB0 384 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 DPY19L2P2Q6ZN68 376 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 NCCRP1Q6ZVX7 275 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-229ENST00000486665 FJX1Q86VR8 437 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 UEVLDQ8IX04 471 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 TUSC5Q8IXB3 177 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 ANKK1Q8NFD2 765 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 MBD3L2Q8NHZ7 208 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-229ENST00000486665 ZNF385AQ96PM9 386 aaKnown RBP11.35□□□□□ -0.59
HDAC6-229ENST00000486665 TSPAN32Q96QS1 320 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 GPX7Q96SL4 187 aaPredicted RBP11.35□□□□□ -0.59
HDAC6-229ENST00000486665 TTYH2Q9BSA4 534 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 KATNB1Q9BVA0 655 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 IFT27Q9BW83 186 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 GABARAPL3Q9BY60 117 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 NRIP3Q9NQ35 241 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 C8orf4Q9NR00 106 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 TBC1D23Q9NUY8 699 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 MED29Q9NX70 200 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 ZNF346Q9UL40 294 aaKnown RBP11.35□□□□□ -0.59
HDAC6-229ENST00000486665 ADAM18Q9Y3Q7 739 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 NOX1Q9Y5S8 564 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 IER3IP1Q9Y5U9 82 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 FLVCR1Q9Y5Y0 555 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 GTF3C1Q12789 2109 aa11.35□□□□□ -0.59
HDAC6-229ENST00000486665 BHLHE40O14503 412 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 YES1P07947 543 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 STSP08842 583 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 ZNF43P17038 809 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 CA7P43166 264 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 RAD23AP54725 363 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 CLDN17P56750 224 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 POU3F1Q03052 451 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-229ENST00000486665 RUNX1T1Q06455 604 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 PMPCAQ10713 525 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 FOXF2Q12947 444 aa11.34□□□□□ -0.59
HDAC6-229ENST00000486665 TOP3AQ13472 1001 aaPredicted RBP11.34□□□□□ -0.59
HDAC6-229ENST00000486665 C1DQ13901 141 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms