RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 KIF3AQ9Y496 699 aa2.69□□□□□ -1.98
LTN1-206ENST00000486427 IGLV2-18A0A075B6J9 118 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 BET1O15155 118 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 SMPD2O60906 423 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 RBBP9O75884 186 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 BGLAPP02818 100 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 KRT13P13646 458 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 OMGP23515 440 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 IL12AP29459 219 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 PIANPQ8IYJ0 282 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 ZNF683Q8IZ20 524 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 FAM133AQ8N9E0 248 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 MAIP1Q8WWC4 291 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 UBE2E3Q969T4 207 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 ECSITQ9BQ95 431 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 GBA3Q9H227 469 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 NHEJ1Q9H9Q4 299 aaPredicted RBP2.68□□□□□ -1.98
LTN1-206ENST00000486427 TM9SF3Q9HD45 589 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 ZNF222Q9UK12 451 aa2.68□□□□□ -1.98
LTN1-206ENST00000486427 MN1Q10571 1320 aaPredicted RBP2.68□□□□□ -1.98
LTN1-206ENST00000486427 IGLV3-22A0A075B6J6 115 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 PRKAB2O43741 272 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 ZDHHC11BP0C7U3 371 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 CCDC130P13994 396 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 CELP19835 753 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 GNA11P29992 359 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 RDXP35241 583 aaKnown RBP2.67□□□□□ -1.98
LTN1-206ENST00000486427 CBX1P83916 185 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 GANABQ14697 944 aaKnown RBP2.67□□□□□ -1.98
LTN1-206ENST00000486427 CHRFAM7AQ494W8 412 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 COA6Q5JTJ3 125 aaKnown RBP2.67□□□□□ -1.98
LTN1-206ENST00000486427 KPRPQ5T749 579 aaPredicted RBP2.67□□□□□ -1.98
LTN1-206ENST00000486427 ZNF679Q8IYX0 411 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 FNDC5Q8NAU1 212 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 OR5W2Q8NH69 310 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 TPPP3Q9BW30 176 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 PALMDQ9NP74 551 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 ZDHHC4Q9NPG8 344 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 UFSP2Q9NUQ7 469 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 RNF14Q9UBS8 474 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 MARCOQ9UEW3 520 aaPredicted RBP2.67□□□□□ -1.98
LTN1-206ENST00000486427 TMCO1Q9UM00 188 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 FANCIQ9NVI1 1328 aa2.67□□□□□ -1.98
LTN1-206ENST00000486427 METTL21EPA6NDL7 271 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 H3BNH8 94 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 RAMP3O60896 148 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 NPY1RP25929 384 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 RPL13AP40429 203 aaKnown RBP2.66□□□□□ -1.98
LTN1-206ENST00000486427 NCBP2P52298 156 aaKnown RBP eCLIP2.66□□□□□ -1.98
LTN1-206ENST00000486427 OR5I1Q13606 314 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 PDK4Q16654 411 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 TPD52L1Q16890 204 aaPredicted RBP2.66□□□□□ -1.98
LTN1-206ENST00000486427 TTLL9Q3SXZ7 439 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 ZBED5Q49AG3 693 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 VAX1Q5SQQ9 334 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 FAM92BQ6ZTR7 304 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 LINC00173Q6ZV60 143 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 OR2T34Q8NGX1 318 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 LINC00477Q96M19 166 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 C16orf45Q96MC5 204 aaPredicted RBP2.66□□□□□ -1.98
LTN1-206ENST00000486427 WFIKKN1Q96NZ8 548 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 OR2A5Q96R48 311 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 UGT1A7Q9HAW7 530 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 UGT1A10Q9HAW8 530 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 UGT1A8Q9HAW9 530 aa2.66□□□□□ -1.98
LTN1-206ENST00000486427 A0A1B0GVX0 72 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 MBLAC1A4D2B0 266 aaPredicted RBP2.65□□□□□ -1.99
LTN1-206ENST00000486427 ZNF705GA8MUZ8 300 aaPredicted RBP2.65□□□□□ -1.99
LTN1-206ENST00000486427 TBX19O60806 448 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 KRT8P05787 483 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 ACAA2P42765 397 aaKnown RBP2.65□□□□□ -1.99
LTN1-206ENST00000486427 CRYBB1P53674 252 aaPredicted RBP2.65□□□□□ -1.99
LTN1-206ENST00000486427 POLR2FP61218 127 aaKnown RBP2.65□□□□□ -1.99
LTN1-206ENST00000486427 DPYSL2Q16555 572 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 HSP90AA5PQ58FG0 334 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 TMEM225Q6GV28 225 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 SYNPRQ8TBG9 265 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 CLCC1Q96S66 551 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 YY1AP1Q9H869 796 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 SLC35D1Q9NTN3 355 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 MRPS33Q9Y291 106 aaKnown RBP2.65□□□□□ -1.99
LTN1-206ENST00000486427 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 PLA2R1Q13018 1463 aa2.65□□□□□ -1.99
LTN1-206ENST00000486427 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 IGKV1D-13A0A0B4J2D9 117 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 IGHV5-51A0A0C4DH38 117 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 IGHV3-66A0A0C4DH42 116 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 XKRYO14609 159 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 POLR2DO15514 142 aaKnown RBP2.64□□□□□ -1.99
LTN1-206ENST00000486427 MED7O43513 233 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 IDH1O75874 414 aaKnown RBP2.64□□□□□ -1.99
LTN1-206ENST00000486427 DCNP07585 359 aaKnown RBP2.64□□□□□ -1.99
LTN1-206ENST00000486427 HEXBP07686 556 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 IQCF3P0C7M6 154 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 IGKV1-13P0DP09 117 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 RPA2P15927 270 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 SOX6P35712 828 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 GYG1P46976 350 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 NADK2Q4G0N4 442 aa2.64□□□□□ -1.99
LTN1-206ENST00000486427 CNIH2Q6PI25 160 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms