RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 FAM171A2A8MVW0 826 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 SMAD7O15105 426 aaKnown RBP11.27□□□□□ -0.61
CHMP3-208ENST00000486404 RNF13O43567 381 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF432O94892 652 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 HLA-DOBP13765 273 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 PAX7P23759 505 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 IFNA8P32881 189 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 FABP6P51161 128 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 CRYBA2P53672 197 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 TUBA1BP68363 451 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 TUBA4AP68366 448 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 ETFDHQ16134 617 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF74Q16587 644 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 CEACAM16Q2WEN9 425 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 PGGHGQ32M88 737 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 WDR88Q6ZMY6 472 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 TUBA1AQ71U36 451 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 LINGO2Q7L985 606 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 TMEM123Q8N131 208 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 ANKK1Q8NFD2 765 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 IGFBPL1Q8WX77 278 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF583Q96ND8 569 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 SLC38A2Q96QD8 506 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 ELAC2Q9BQ52 826 aaKnown RBP11.27□□□□□ -0.61
CHMP3-208ENST00000486404 TRAF4Q9BUZ4 470 aaPredicted RBP11.27□□□□□ -0.61
CHMP3-208ENST00000486404 ULBP2Q9BZM5 246 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 CRLF2Q9HC73 371 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 GPR35Q9HC97 309 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 MED29Q9NX70 200 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF229Q9UJW7 825 aa11.27□□□□□ -0.61
CHMP3-208ENST00000486404 SETD2Q9BYW2 2564 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-208ENST00000486404 ARPC4-TTLL3A0A0A6YYG9 625 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 E7EQL1 145 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 MS4A18H0YCH9 400 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 RPL36A-HNRNPH2H7BZ11 118 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 PLPP3O14495 311 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 SHOX2O60902 331 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-208ENST00000486404 SEC14L2O76054 403 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 OR5F1O95221 314 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 CRYAAP02489 173 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 RBM34P42696 430 aaKnown RBP11.26□□□□□ -0.61
CHMP3-208ENST00000486404 OR1E2P47887 323 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 CSNK1A1P48729 337 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 SLC7A2P52569 658 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 BIDP55957 195 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 ARF1P84077 181 aaKnown RBP11.26□□□□□ -0.61
CHMP3-208ENST00000486404 LIPEQ05469 1076 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 LTBQ06643 244 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 MS4A18Q3C1V0 323 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF544Q6NX49 715 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 CLEC9AQ6UXN8 241 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 B3GLCTQ6Y288 498 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 PXKQ7Z7A4 578 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 CPLX4Q7Z7G2 160 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 DTX2Q86UW9 622 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 MUC15Q8N387 334 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 MAGEE2Q8TD90 523 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-208ENST00000486404 BCL2L2Q92843 193 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-208ENST00000486404 CMTM5Q96DZ9 223 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 COX4I2Q96KJ9 171 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 ADAD1Q96M93 576 aaKnown RBP11.26□□□□□ -0.61
CHMP3-208ENST00000486404 EMC6Q9BV81 110 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 EFCAB1Q9HAE3 211 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 BARX1Q9HBU1 254 aaPredicted RBP11.26□□□□□ -0.61
CHMP3-208ENST00000486404 CBLN4Q9NTU7 201 aa11.26□□□□□ -0.61
CHMP3-208ENST00000486404 SLC35F4A4IF30 521 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF99A8MXY4 864 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-208ENST00000486404 MCIDASD6RGH6 385 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 NDUFAB1O14561 156 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 LYPD3O95274 346 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF682O95780 498 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 THY1P04216 161 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 IFNW1P05000 195 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 BMP4P12644 408 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 IFNGR1P15260 489 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 KDELR2P33947 212 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 TTKP33981 857 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 NPRL3Q12980 569 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 CAMK2DQ13557 499 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 CLEC12BQ2HXU8 276 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 LINC00114Q6XXX2 140 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 TSPYL5Q86VY4 417 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-208ENST00000486404 C20orf196Q8IYI0 205 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 TMEM255BQ8WV15 326 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 NANOS1Q8WY41 292 aaKnown RBP11.25□□□□□ -0.61
CHMP3-208ENST00000486404 BOD1Q96IK1 185 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 PRRC1Q96M27 445 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 HOPXQ9BPY8 73 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-208ENST00000486404 KCTD14Q9BQ13 255 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF426Q9BUY5 554 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 KATNB1Q9BVA0 655 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 CACNG6Q9BXT2 260 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 GSX1Q9H4S2 264 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-208ENST00000486404 CMTM6Q9NX76 183 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 MOKQ9UQ07 419 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 POFUT2Q9Y2G5 429 aa11.25□□□□□ -0.61
CHMP3-208ENST00000486404 ZNF469Q96JG9 3925 aaPredicted RBP11.25□□□□□ -0.61
CHMP3-208ENST00000486404 VPS13CQ709C8 3753 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 IGHV1-18A0A0C4DH31 117 aa11.24□□□□□ -0.61
CHMP3-208ENST00000486404 A0A1W2PRG6 482 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms