RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 RINLQ6ZS11 566 aa10.96□□□□□ -0.65
HMG20B-211ENST00000486028 CDH24Q86UP0 819 aa10.96□□□□□ -0.65
HMG20B-211ENST00000486028 LRRC17Q8N6Y2 441 aa10.96□□□□□ -0.65
HMG20B-211ENST00000486028 C1orf162Q8NEQ5 155 aaPredicted RBP10.96□□□□□ -0.65
HMG20B-211ENST00000486028 PFN4Q8NHR9 129 aa10.96□□□□□ -0.65
HMG20B-211ENST00000486028 PYURFQ96I23 114 aa10.96□□□□□ -0.65
HMG20B-211ENST00000486028 ZNF570Q96NI8 536 aa10.96□□□□□ -0.65
HMG20B-211ENST00000486028 MUS81Q96NY9 551 aa10.96□□□□□ -0.65
HMG20B-211ENST00000486028 LINC00470Q9BZP3 86 aa10.96□□□□□ -0.65
HMG20B-211ENST00000486028 RHCGQ9UBD6 479 aa10.96□□□□□ -0.65
HMG20B-211ENST00000486028 PDZD2O15018 2839 aa10.96□□□□□ -0.66
HMG20B-211ENST00000486028 ANKRD17O75179 2603 aaKnown RBP10.96□□□□□ -0.66
HMG20B-211ENST00000486028 ALPK2Q86TB3 2170 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.95□□□□□ -0.66
HMG20B-211ENST00000486028 ZNF726A6NNF4 738 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 C11orf98E9PRG8 122 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 J3KTA2 159 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 SIAH2O43255 324 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 RNF13O43567 381 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 RAD51DO75771 328 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 ZNF432O94892 652 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 ITGA5P08648 1049 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 ASAH2BP0C7U1 165 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 HLA-DOBP13765 273 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 ITGA2P17301 1181 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 RHCEP18577 417 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 MMP16P51512 607 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 POU3F1Q03052 451 aaPredicted RBP10.95□□□□□ -0.66
HMG20B-211ENST00000486028 BLMHQ13867 455 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 PPA1Q15181 289 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 GABRA6Q16445 453 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 C1QTNF12Q5T7M4 302 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 C9orf135Q5VTT2 229 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 HMBOX1Q6NT76 420 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 NHLRC1Q6VVB1 395 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 ZNF730Q6ZMV8 503 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 RRM2BQ7LG56 351 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 SLC46A3Q7Z3Q1 461 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 NANOGNBQ7Z5D8 188 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 CDK20Q8IZL9 346 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 RNF113BQ8IZP6 322 aaKnown RBP10.95□□□□□ -0.66
HMG20B-211ENST00000486028 GPR137CQ8N3F9 429 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 PIK3C3Q8NEB9 887 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 ACOT11Q8WXI4 607 aaPredicted RBP10.95□□□□□ -0.66
HMG20B-211ENST00000486028 MCUR1Q96AQ8 359 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 PLPPR2Q96GM1 343 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 C7orf34Q96L11 122 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 OR2M2Q96R28 347 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 C1orf21Q9H246 121 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 ANKRD19PQ9H560 264 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 PLEKHF2Q9H8W4 249 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 NMNAT1Q9HAN9 279 aaPredicted RBP10.95□□□□□ -0.66
HMG20B-211ENST00000486028 TAS2R5Q9NYW4 299 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 NDUFAF4Q9P032 175 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 PRPF19Q9UMS4 504 aaKnown RBP10.95□□□□□ -0.66
HMG20B-211ENST00000486028 LRRC42Q9Y546 428 aa10.95□□□□□ -0.66
HMG20B-211ENST00000486028 PRR14LQ5THK1 2151 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 SLC35F4A4IF30 521 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 BLOC1S5-TXNDC5H3BN57 136 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 UPK3AO75631 287 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 SERPINI2O75830 405 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 PRSS23O95084 383 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 H1F0P07305 194 aaKnown RBP10.94□□□□□ -0.66
HMG20B-211ENST00000486028 IFI30P13284 250 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 CDH2P19022 906 aaPredicted RBP10.94□□□□□ -0.66
HMG20B-211ENST00000486028 RASSF2P50749 326 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 FOXG1P55316 489 aaPredicted RBP10.94□□□□□ -0.66
HMG20B-211ENST00000486028 SMIM11AP58511 58 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 ROR2Q01974 943 aaKnown RBP10.94□□□□□ -0.66
HMG20B-211ENST00000486028 LGALS3BPQ08380 585 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 CARD17Q5XLA6 110 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 TSEN54Q7Z6J9 526 aaKnown RBP10.94□□□□□ -0.66
HMG20B-211ENST00000486028 C20orf196Q8IYI0 205 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 TMEM123Q8N131 208 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 C17orf78Q8N4C9 275 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 FAM86B1Q8N7N1 296 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 LIPHQ8WWY8 451 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 NRGNQ92686 78 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 BPIFA2Q96DR5 249 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 TXNDC15Q96J42 360 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 LRR1Q96L50 414 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 EMC6Q9BV81 110 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 MUC13Q9H3R2 512 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 ESRP2Q9H6T0 727 aaKnown RBP10.94□□□□□ -0.66
HMG20B-211ENST00000486028 B3GAT2Q9NPZ5 323 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 MAN2C1Q9NTJ4 1040 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 C20orf141Q9NUB4 165 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 TAS2R1Q9NYW7 299 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 ACTR3BQ9P1U1 418 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 V9GYQ6 96 aa10.94□□□□□ -0.66
HMG20B-211ENST00000486028 HRNRQ86YZ3 2850 aaPredicted RBP10.94□□□□□ -0.66
HMG20B-211ENST00000486028 ROS1P08922 2347 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 A0A1W2PRQ8 180 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 A6NHS1 94 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 RPL36A-HNRNPH2H7BZ11 118 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 hCG_2039718K7EN88 272 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 IFNGR1P15260 489 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 PAX7P23759 505 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 DNASE1P24855 282 aa10.93□□□□□ -0.66
HMG20B-211ENST00000486028 LOXP28300 417 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms