RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 AKR7A3O95154 331 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 FAM107AO95990 144 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 IGHV3-9P01782 118 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 F13BP05160 661 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 ITGA5P08648 1049 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 HLA-DOBP13765 273 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 CCNA2P20248 432 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 RBM34P42696 430 aaKnown RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 GSK3BP49841 420 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 ZNF133P52736 654 aaPredicted RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 RGS8P57771 180 aaPredicted RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 OR2B6P58173 313 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 GNGT1P63211 74 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 LIPEQ05469 1076 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 MFSD13AQ14CX5 517 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 TAB1Q15750 504 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 STK11Q15831 433 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 GABRA6Q16445 453 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 HIST3H3Q16695 136 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 CYP51A1Q16850 503 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 MMEL1Q495T6 779 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 CYBRD1Q53TN4 286 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 ENTPD8Q5MY95 495 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 TIMM23BQ5SRD1 257 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 OTUD3Q5T2D3 398 aaPredicted RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 B3GLCTQ6Y288 498 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 H1FNTQ75WM6 255 aaPredicted RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 SLC46A3Q7Z3Q1 461 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 STK32CQ86UX6 486 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 RANBP3LQ86VV4 465 aaPredicted RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 CXorf67Q86X51 503 aaPredicted RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 MEX3DQ86XN8 651 aaKnown RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 ZDHHC13Q8IUH4 622 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 TMEM123Q8N131 208 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 CADM2Q8N3J6 435 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 WDR31Q8NA23 367 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 FAM156AQ8NDB6 213 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 C1orf162Q8NEQ5 155 aaPredicted RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 STEAP2Q8NFT2 490 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 MAGEE2Q8TD90 523 aaPredicted RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 HSD17B8Q92506 261 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 NEUROG1Q92886 237 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 ZHX1-C8orf76Q96EF9 292 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 C7orf34Q96L11 122 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 LRR1Q96L50 414 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 DHRS1Q96LJ7 313 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 OXGR1Q96P68 337 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 ZNF385AQ96PM9 386 aaKnown RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 MCHR1Q99705 422 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 FOXC2Q99958 501 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 NAA11Q9BSU3 229 aaPredicted RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 PRRG4Q9BZD6 226 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 TMEM27Q9HBJ8 222 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 SLC7A10Q9NS82 523 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 PARPBPQ9NWS1 579 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 KLHL28Q9NXS3 571 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 MRPL39Q9NYK5 338 aaKnown RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 TAS2R5Q9NYW4 299 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 EMC3Q9P0I2 261 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 CRNNQ9UBG3 495 aaPredicted RBP5.02□□□□□ -1.61
CUX1-208ENST00000485792 ST6GALNAC2Q9UJ37 374 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 ADAM21Q9UKJ8 722 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 BAG5Q9UL15 447 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 A4GNTQ9UNA3 340 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 RCE1Q9Y256 329 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 RASD1Q9Y272 281 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 SLC9A8Q9Y2E8 581 aa5.02□□□□□ -1.61
CUX1-208ENST00000485792 NAV3Q8IVL0 2385 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 WNK2Q9Y3S1 2297 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 OR6C65A6NJZ3 312 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 OR5H1A6NKK0 313 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 J3KTA2 159 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 PLPP3O14495 311 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 AIM2O14862 343 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 TMCC2O75069 709 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 MRPL33O75394 65 aaKnown RBP5.01□□□□□ -1.61
CUX1-208ENST00000485792 OR5F1O95221 314 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 PLGP00747 810 aaPredicted RBP5.01□□□□□ -1.61
CUX1-208ENST00000485792 ADAP00813 363 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 MT-ATP6P00846 226 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 TFPIP10646 304 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 NCK1P16333 377 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 CD53P19397 219 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 GGT1P19440 569 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 ANOS1P23352 680 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 GRPRP30550 384 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 RPS5P46782 204 aaKnown RBP5.01□□□□□ -1.61
CUX1-208ENST00000485792 SLC7A2P52569 658 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 UGT2B15P54855 530 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 FXYD6P3P58550 94 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 PSME3P61289 254 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 RPS4XP62701 263 aaKnown RBP5.01□□□□□ -1.61
CUX1-208ENST00000485792 HNRNPA0Q13151 305 aaKnown RBP5.01□□□□□ -1.61
CUX1-208ENST00000485792 OR7A5Q15622 319 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 ZNF74Q16587 644 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 MSMPQ1L6U9 139 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 C3orf36Q3SXR2 165 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 TMEM255AQ5JRV8 349 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 NCMAPQ5T1S8 102 aa5.01□□□□□ -1.61
CUX1-208ENST00000485792 TSPO2Q5TGU0 170 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms