RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ENKD1Q9H0I2 346 aa7.34□□□□□ -1.23
SF3A1-208ENST00000485618 OR10A4Q9H209 315 aa7.34□□□□□ -1.23
SF3A1-208ENST00000485618 SLCO5A1Q9H2Y9 848 aa7.34□□□□□ -1.23
SF3A1-208ENST00000485618 NGBQ9NPG2 151 aa7.34□□□□□ -1.23
SF3A1-208ENST00000485618 MEPEQ9NQ76 525 aaPredicted RBP7.34□□□□□ -1.23
SF3A1-208ENST00000485618 INIPQ9NRY2 104 aa7.34□□□□□ -1.23
SF3A1-208ENST00000485618 ARMC1Q9NVT9 282 aa7.34□□□□□ -1.23
SF3A1-208ENST00000485618 ZNF226Q9NYT6 803 aa7.34□□□□□ -1.23
SF3A1-208ENST00000485618 GRHPRQ9UBQ7 328 aa7.34□□□□□ -1.23
SF3A1-208ENST00000485618 MGAT4BQ9UQ53 548 aa7.34□□□□□ -1.23
SF3A1-208ENST00000485618 MPDZO75970 2070 aa7.34□□□□□ -1.23
SF3A1-208ENST00000485618 FBN3Q75N90 2809 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 TRBV4-1A0A0J9YWV2 114 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 CIB4A0PJX0 185 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 NKX2-6A6NCS4 301 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 ARRDC5A6NEK1 342 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 UNC119BA6NIH7 251 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 NPIPB13A6NJU9 1138 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 KDM4EB2RXH2 506 aaPredicted RBP7.33□□□□□ -1.24
SF3A1-208ENST00000485618 NPIPB4C9JG80 1138 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 C11orf98E9PRG8 122 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 MS4A18H0YCH9 400 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 IDH3BO43837 385 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 AHCYL1O43865 530 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 MGRN1O60291 552 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 IGHG1P01857 330 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 FPR3P25089 353 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 HOXC12P31275 282 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 KIR2DL3P43628 341 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 RPS6KA3P51812 740 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 ACTR3P61158 418 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 POU3F1Q03052 451 aaPredicted RBP7.33□□□□□ -1.24
SF3A1-208ENST00000485618 LTBQ06643 244 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 ITGADQ13349 1161 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 MICAQ29983 383 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 MS4A18Q3C1V0 323 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 NIPAL3Q6P499 406 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 VWA1Q6PCB0 445 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 SMARCD3Q6STE5 483 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 PLXDC2Q6UX71 529 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 TFAP2EQ6VUC0 442 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 DPY19L2P2Q6ZN68 376 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 NCCRP1Q6ZVX7 275 aaPredicted RBP7.33□□□□□ -1.24
SF3A1-208ENST00000485618 SLC35D2Q76EJ3 337 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 NUFIP2Q7Z417 695 aaKnown RBP7.33□□□□□ -1.24
SF3A1-208ENST00000485618 TSPYL5Q86VY4 417 aaPredicted RBP7.33□□□□□ -1.24
SF3A1-208ENST00000485618 HIPK1Q86Z02 1210 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 CCDC36Q8IYA8 594 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 OR52L1Q8NGH7 329 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 OR6N1Q8NGY5 312 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 OR51A7Q8NH64 312 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 OR6X1Q8NH79 312 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 PFN4Q8NHR9 129 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 GIPC3Q8TF64 312 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 FAM222BQ8WU58 562 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 DNAJC9Q8WXX5 260 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 HSD17B8Q92506 261 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 ZNF566Q969W8 418 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 DUS3LQ96G46 650 aaKnown RBP7.33□□□□□ -1.24
SF3A1-208ENST00000485618 SLC25A44Q96H78 314 aaPredicted RBP7.33□□□□□ -1.24
SF3A1-208ENST00000485618 LURAP1Q96LR2 239 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 DACH2Q96NX9 599 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 RBP7Q96R05 134 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 LINC00470Q9BZP3 86 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 OPN3Q9H1Y3 402 aaPredicted RBP7.33□□□□□ -1.24
SF3A1-208ENST00000485618 MAN2C1Q9NTJ4 1040 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 C20orf141Q9NUB4 165 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 KCNN3Q9UGI6 736 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 ENOPH1Q9UHY7 261 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 ITGB1BP2Q9UKP3 347 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 EDARQ9UNE0 448 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 HIF3AQ9Y2N7 669 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 LYVE1Q9Y5Y7 322 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 ANKHD1Q8IWZ3 2542 aaKnown RBP7.33□□□□□ -1.24
SF3A1-208ENST00000485618 ADGRG4Q8IZF6 3080 aa7.33□□□□□ -1.24
SF3A1-208ENST00000485618 NCOA6Q14686 2063 aaPredicted RBP7.32□□□□□ -1.24
SF3A1-208ENST00000485618 SERPINI2O75830 405 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 NDUFB2O95178 105 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 GOSR1O95249 250 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 ADAP00813 363 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 CGAP01215 116 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 ANXA8P13928 327 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 HOXB1P14653 301 aaPredicted RBP7.32□□□□□ -1.24
SF3A1-208ENST00000485618 IFNGR1P15260 489 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 PSMB1P20618 241 aaKnown RBP7.32□□□□□ -1.24
SF3A1-208ENST00000485618 MPGP29372 298 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 NOS3P29474 1203 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 SLC6A6P31641 620 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 UGT2B10P36537 528 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 AQP2P41181 271 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 GPR4P46093 362 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 OMPP47874 163 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 P2RY4P51582 365 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 BIDP55957 195 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 CLRN1P58418 232 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 RPL18Q07020 188 aaKnown RBP7.32□□□□□ -1.24
SF3A1-208ENST00000485618 TSPAN31Q12999 210 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 STK11Q15831 433 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 IQCCQ4KMZ1 466 aa7.32□□□□□ -1.24
SF3A1-208ENST00000485618 SFRP5Q5T4F7 317 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms