RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.98□□□□□ -0.33
LRIF1-202ENST00000485275 KRR1Q13601 381 aaKnown RBP12.98□□□□□ -0.33
LRIF1-202ENST00000485275 ARMC4Q5T2S8 1044 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 PLBD1Q6P4A8 553 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 FGD2Q7Z6J4 655 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 CPOQ8IVL8 374 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 NPEPL1Q8NDH3 523 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 BPIFB6Q8NFQ5 453 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 ZNRF4Q8WWF5 429 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 ROBO4Q8WZ75 1007 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 PTP4A1Q93096 173 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 ZNF566Q969W8 418 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 PNPLA2Q96AD5 504 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 WDYHV1Q96HA8 205 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 ZNF696Q9H7X3 374 aa12.98□□□□□ -0.33
LRIF1-202ENST00000485275 ATRXP46100 2492 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 A0A1B0GVC2 190 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 OR6A2O95222 327 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 CARD18P57730 90 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 TEKQ02763 1124 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 ITGADQ13349 1161 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 OCLNQ16625 522 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 SLC25A30Q5SVS4 291 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 ABLIM2Q6H8Q1 611 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 C19orf48Q6RUI8 117 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 CXXC5Q7LFL8 322 aaKnown RBP12.97□□□□□ -0.33
LRIF1-202ENST00000485275 PXKQ7Z7A4 578 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 GPAT4Q86UL3 456 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 OR9Q1Q8NGQ5 310 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 ASB10Q8WXI3 467 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 KISS1RQ969F8 398 aaPredicted RBP12.97□□□□□ -0.33
LRIF1-202ENST00000485275 TXNIPQ9H3M7 391 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 EXO5Q9H790 373 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 TUBD1Q9UJT1 453 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 ING1Q9UK53 422 aaPredicted RBP12.97□□□□□ -0.33
LRIF1-202ENST00000485275 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 DCTN6O00399 190 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 DNPH1O43598 174 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 MPZL2O60487 215 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 TNFAIP8O95379 198 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 GYPBP06028 91 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 SLC2A5P22732 501 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 RPL27P61353 136 aaKnown RBP12.97□□□□□ -0.33
LRIF1-202ENST00000485275 MVKQ03426 396 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 INAQ16352 499 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 BCL2A1Q16548 175 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 PRR30Q53SZ7 412 aaPredicted RBP12.97□□□□□ -0.33
LRIF1-202ENST00000485275 ZNF324BQ6AW86 544 aaPredicted RBP12.97□□□□□ -0.33
LRIF1-202ENST00000485275 NIPAL3Q6P499 406 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 B3GLCTQ6Y288 498 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 ANKK1Q8NFD2 765 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 PLEKHA8Q96JA3 519 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 TSSK2Q96PF2 358 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 ARHGAP9Q9BRR9 750 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 EMC6Q9BV81 110 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 PRRG3Q9BZD7 231 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 NMNAT2Q9BZQ4 307 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 GRHPRQ9UBQ7 328 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 MYRFQ9Y2G1 1151 aa12.97□□□□□ -0.33
LRIF1-202ENST00000485275 TPRP12270 2363 aaKnown RBP12.96□□□□□ -0.33
LRIF1-202ENST00000485275 CCDC182A6NF36 153 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 RIIAD1A6NNX1 92 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 ZNF716A6NP11 495 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 EIF1BO60739 113 aaKnown RBP12.96□□□□□ -0.34
LRIF1-202ENST00000485275 CPN1P15169 458 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 ZNF3P17036 446 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 NTF4P34130 210 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 SLC15A1P46059 708 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 CXCR4P61073 352 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 SLC35A2P78381 396 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 ZNF91Q05481 1191 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 SLC17A1Q14916 467 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 KCTD21Q4G0X4 260 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 LEG1Q6P5S2 330 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 PCSK4Q6UW60 755 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 SLC35D2Q76EJ3 337 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 ARIH2OSQ8N7S6 290 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 ABHD3Q8WU67 409 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 OXGR1Q96P68 337 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 ZNF385AQ96PM9 386 aaKnown RBP12.96□□□□□ -0.34
LRIF1-202ENST00000485275 PRDM14Q9GZV8 571 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 FKBP14Q9NWM8 211 aa12.96□□□□□ -0.34
LRIF1-202ENST00000485275 SMG1Q96Q15 3661 aaKnown RBP12.95□□□□□ -0.34
LRIF1-202ENST00000485275 A0A1B0GTH9 108 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 LOC102725191A0A1B0GVB3 256 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 NPIPB13A6NJU9 1138 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 NPIPB4C9JG80 1138 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 AQP7O14520 342 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 IDH3BO43837 385 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 AQP8O94778 261 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 CCDC159P0C7I6 412 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 DBTP11182 482 aaKnown RBP12.95□□□□□ -0.34
LRIF1-202ENST00000485275 ACVR1BP36896 505 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 PON3Q15166 354 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 POU4F3Q15319 338 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 RBM48Q5RL73 367 aaKnown RBP12.95□□□□□ -0.34
LRIF1-202ENST00000485275 NXNL2Q5VZ03 156 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 GPR139Q6DWJ6 353 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 TMEM225Q6GV28 225 aa12.95□□□□□ -0.34
LRIF1-202ENST00000485275 LYPD4Q6UWN0 246 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 200.5 ms