RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	LINC01561	Q8N1V8	128 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	3	□□□□□ -1.93
VPS8-223	ENST00000485024	ATP6V0D2	Q8N8Y2	350 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	OR4D9	Q8NGE8	314 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	OR5L2	Q8NGL0	311 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	STMN2	Q93045	179 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	UBE2E3	Q969T4	207 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	PSMG2	Q969U7	264 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	FGGY	Q96C11	551 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	C10orf35	Q96D05	121 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	MS4A14	Q96JA4	679 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	IL4I1	Q96RQ9	567 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	CCNL2	Q96S94	520 aa	Predicted RBP	3	□□□□□ -1.93
VPS8-223	ENST00000485024	CCT8L2	Q96SF2	557 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	CHRDL1	Q9BU40	450 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	GON7	Q9BXV9	100 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	FANCF	Q9NPI8	374 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	SLC7A10	Q9NS82	523 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	SIGLEC8	Q9NYZ4	499 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	DHRS4-AS1	Q9P1J3	65 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	PPIAL4A	Q9Y536	164 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	FLVCR1	Q9Y5Y0	555 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	PTPRQ	Q9UMZ3	2332 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	MAST2	Q6P0Q8	1798 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	RTL1	A6NKG5	1358 aa		3	□□□□□ -1.93
VPS8-223	ENST00000485024	MTOR	P42345	2549 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	CLSPN	Q9HAW4	1339 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ATR	Q13535	2644 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	NOTCH1	P46531	2555 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	PPIAL4E	A0A075B759	164 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	LOC100131303	A0A0U1RQF7	123 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024		A0A1B0GVL5	298 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ARHGEF35	A5YM69	484 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	GOLGA8O	A6NCC3	632 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ZNF716	A6NP11	495 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	IDS	B3KWA1	339 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	GOLGA8N	F8WBI6	632 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	HIP1	O00291	1037 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	SAP18	O00422	153 aa	Known RBP	2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	PFKFB2	O60825	505 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	SCRG1	O75711	98 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	DIRAS1	O95057	198 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ZNF735	P0CB33	412 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	PPIAL4F	P0DN26	164 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	SHC1	P29353	583 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	UGT1A3	P35503	534 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	GCK	P35557	465 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	TAGLN2	P37802	199 aa	Known RBP	2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	DUSP3	P51452	185 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	DSCR10	P59022	87 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	KLRB1	Q12918	225 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	RUNX3	Q13761	415 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	CFAP221	Q4G0U5	840 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	SLC22A6	Q4U2R8	563 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	C1orf220	Q5T0J3	134 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	PDZK1	Q5T2W1	519 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ARMC12	Q5T9G4	340 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ZNF658	Q5TYW1	1059 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	RNLS	Q5VYX0	342 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	UFSP1	Q6NVU6	142 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	FAM199X	Q6PEV8	388 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	BAIAP2L2	Q6UXY1	529 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ARC	Q7LC44	396 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	FAM228A	Q86W67	206 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	CDR2L	Q86X02	465 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	EGFL6	Q8IUX8	553 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	OR9A1P	Q8NGU1	263 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	PHOSPHO2	Q8TCD6	241 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ANKRD49	Q8WVL7	239 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	FAF2	Q96CS3	445 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	NUS1	Q96E22	293 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	CELF6	Q96J87	481 aa	Known RBP	2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	SERAC1	Q96JX3	654 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	SLC38A2	Q96QD8	506 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	RIOK1	Q9BRS2	568 aa	Known RBP	2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ZNF670	Q9BS34	389 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ROPN1B	Q9BZX4	212 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	GLIPR2	Q9H4G4	154 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	METTL7A	Q9H8H3	244 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	POPDC2	Q9HBU9	364 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	POLE4	Q9NR33	117 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	RAB20	Q9NX57	234 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	B3GNT2	Q9NY97	397 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	RSPH14	Q9UHP6	348 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	RIMS3	Q9UJD0	308 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ERVW-1	Q9UQF0	538 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	PDE10A	Q9Y233	779 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	CAB39	Q9Y376	341 aa	Predicted RBP	2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	COL12A1	Q99715	3063 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	JMJD1C	Q15652	2540 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	CEP295	Q9C0D2	2601 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	NID2	Q14112	1375 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	FLNC	Q14315	2725 aa		2.99	□□□□□ -1.93
VPS8-223	ENST00000485024	ZSWIM8	A7E2V4	1837 aa		2.98	□□□□□ -1.93
VPS8-223	ENST00000485024	IQANK1	A0A1B0GTG1	560 aa		2.98	□□□□□ -1.93
VPS8-223	ENST00000485024		A0A1B0GWB2	263 aa		2.98	□□□□□ -1.93
VPS8-223	ENST00000485024	HEATR9	A2RTY3	570 aa		2.98	□□□□□ -1.93
VPS8-223	ENST00000485024		A8MXQ7	604 aa		2.98	□□□□□ -1.93
VPS8-223	ENST00000485024		K7ENP7	123 aa		2.98	□□□□□ -1.93
VPS8-223	ENST00000485024	TBL1X	O60907	577 aa		2.98	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms