RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 MRPL45Q9BRJ2 306 aaKnown RBP2.68□□□□□ -1.98
SMC4-215ENST00000484799 C11orf70Q9BRQ4 267 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 CNPY3Q9BT09 278 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 C20orf24Q9BUV8 137 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 RNF126Q9BV68 326 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 IQCGQ9H095 443 aaKnown RBP2.68□□□□□ -1.98
SMC4-215ENST00000484799 GBA3Q9H227 469 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 RANBP3Q9H6Z4 567 aaPredicted RBP2.68□□□□□ -1.98
SMC4-215ENST00000484799 AUNIPQ9H7T9 357 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 ZNF702PQ9H963 129 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 NANOGQ9H9S0 305 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 ZNF160Q9HCG1 818 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 IL26Q9NPH9 171 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 KIAA1257Q9ULG3 409 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 STAP1Q9ULZ2 295 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 UBQLN1Q9UMX0 589 aaKnown RBP2.68□□□□□ -1.98
SMC4-215ENST00000484799 V9GY05 133 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 PLEKHG2Q9H7P9 1386 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 NINLQ9Y2I6 1382 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 WDR19Q8NEZ3 1342 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 SYNRGQ9UMZ2 1314 aa2.68□□□□□ -1.98
SMC4-215ENST00000484799 IGHV3OR16-13A0A075B7E8 117 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 H0YC42 278 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 GFYI3L273 518 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 DLGAP1O14490 977 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 IGHV3-23P01764 117 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 ABOP16442 354 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 EIF2S2P20042 333 aaKnown RBP2.67□□□□□ -1.98
SMC4-215ENST00000484799 NPR2P20594 1047 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 FOXN2P32314 431 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 TFPI2P48307 235 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 RAB9AP51151 201 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 FBXW4P57775 412 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 MRPS22P82650 360 aaKnown RBP2.67□□□□□ -1.98
SMC4-215ENST00000484799 PPIL2Q13356 520 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 GPRC6AQ5T6X5 926 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 OR2G6Q5TZ20 316 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 C1orf146Q5VVC0 180 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 TIGD3Q6B0B8 471 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 SLC8B1Q6J4K2 584 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 SSX9Q7RTT3 188 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 SCD5Q86SK9 330 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 ZNF589Q86UQ0 364 aaPredicted RBP2.67□□□□□ -1.98
SMC4-215ENST00000484799 RDH10Q8IZV5 341 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 COMMD1Q8N668 190 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 FAM184AQ8NB25 1140 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 SDR9C7Q8NEX9 313 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 B3GNT7Q8NFL0 401 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 OR10G3Q8NGC4 313 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 OR2AP1Q8NGE2 309 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 OR51S1Q8NGJ8 323 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 KCTD14Q9BQ13 255 aaPredicted RBP2.67□□□□□ -1.98
SMC4-215ENST00000484799 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 MRPL47Q9HD33 250 aaKnown RBP2.67□□□□□ -1.98
SMC4-215ENST00000484799 DDX18Q9NVP1 670 aaKnown RBP2.67□□□□□ -1.98
SMC4-215ENST00000484799 GIN1Q9NXP7 522 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 TREM2Q9NZC2 230 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 KCNIP1Q9NZI2 227 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 RAB26Q9ULW5 256 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 LRRK1Q38SD2 2015 aa2.67□□□□□ -1.98
SMC4-215ENST00000484799 IGLV3-16A0A075B6K0 115 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 TUBAL3A6NHL2 446 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 NCF1BA6NI72 391 aaPredicted RBP2.66□□□□□ -1.98
SMC4-215ENST00000484799 NCF1CA8MVU1 366 aaPredicted RBP2.66□□□□□ -1.98
SMC4-215ENST00000484799 K7N7A8 449 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 LSM1O15116 133 aaKnown RBP2.66□□□□□ -1.98
SMC4-215ENST00000484799 CLOCKO15516 846 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 MGRN1O60291 552 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 OR2F2O95006 317 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 H6PDO95479 791 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 IGHV3-48P01763 117 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 UBTFL1P0CB47 393 aaPredicted RBP2.66□□□□□ -1.98
SMC4-215ENST00000484799 ZNF43P17038 809 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 GABRR1P24046 479 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 AQP1P29972 269 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 RFX3P48380 749 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 ARRB1P49407 418 aaPredicted RBP2.66□□□□□ -1.98
SMC4-215ENST00000484799 UGT2B15P54855 530 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 RIPPLY3P57055 190 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 RAB10P61026 200 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 CHRNA6Q15825 494 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 Q6P435 159 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 CERS6Q6ZMG9 384 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 Q6ZN92 141 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 EIF3MQ7L2H7 374 aaKnown RBP2.66□□□□□ -1.98
SMC4-215ENST00000484799 ZNF571Q7Z3V5 609 aaPredicted RBP2.66□□□□□ -1.98
SMC4-215ENST00000484799 PEX26Q7Z412 305 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 HSD17B13Q7Z5P4 300 aaPredicted RBP2.66□□□□□ -1.98
SMC4-215ENST00000484799 TMEM135Q86UB9 458 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 ZNF100Q8IYN0 542 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 TMEM252Q8N6L7 170 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 ACMSDQ8TDX5 336 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 CHCHD10Q8WYQ3 142 aaPredicted RBP2.66□□□□□ -1.98
SMC4-215ENST00000484799 FGF11Q92914 225 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 HSFY1Q96LI6 401 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 SORT1Q99523 831 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 P2RY13Q9BPV8 354 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 NICN1Q9BSH3 213 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 FAIM2Q9BWQ8 316 aa2.66□□□□□ -1.98
SMC4-215ENST00000484799 PTGES2Q9H7Z7 377 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms