RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 MYLK2Q9H1R3 596 aa10.74□□□□□ -0.69
MSH5-216ENST00000484309 NELFAQ9H3P2 528 aa10.74□□□□□ -0.69
MSH5-216ENST00000484309 GSX1Q9H4S2 264 aaPredicted RBP10.74□□□□□ -0.69
MSH5-216ENST00000484309 CXorf56Q9H5V9 222 aa10.74□□□□□ -0.69
MSH5-216ENST00000484309 EFCAB1Q9HAE3 211 aa10.74□□□□□ -0.69
MSH5-216ENST00000484309 CRLF2Q9HC73 371 aa10.74□□□□□ -0.69
MSH5-216ENST00000484309 GPR35Q9HC97 309 aa10.74□□□□□ -0.69
MSH5-216ENST00000484309 GMNCA6NCL1 334 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 TRIM64A6NGJ6 449 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 TRIM64BA6NI03 449 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 OR6C65A6NJZ3 312 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 E7EQL1 145 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 ATP6V1G2-DDX39BF2Z307 99 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 CXCR6O00574 342 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 GSTA4O15217 222 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 PIP5K1CO60331 668 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 SNX3O60493 162 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 OR6A2O95222 327 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 ZNF682O95780 498 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 WNT11O96014 354 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 MT-ATP6P00846 226 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 NCK1P16333 377 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 YAP1P46937 504 aaKnown RBP10.73□□□□□ -0.69
MSH5-216ENST00000484309 BIDP55957 195 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 ATP5J2P56134 94 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 UBE2NP61088 152 aaKnown RBP10.73□□□□□ -0.69
MSH5-216ENST00000484309 MELKQ14680 651 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 SLC46A3Q7Z3Q1 461 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 PIK3C3Q8NEB9 887 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 GTPBP3Q969Y2 492 aaKnown RBP10.73□□□□□ -0.69
MSH5-216ENST00000484309 MPP4Q96JB8 637 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 SMR3AQ99954 134 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 ZNF426Q9BUY5 554 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 GSX2Q9BZM3 304 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 ALG2Q9H553 416 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 SEC61A2Q9H9S3 476 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 MEPEQ9NQ76 525 aaPredicted RBP10.73□□□□□ -0.69
MSH5-216ENST00000484309 NANSQ9NR45 359 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 DLL4Q9NR61 685 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 RHCGQ9UBD6 479 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 RIMS3Q9UJD0 308 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 NOX1Q9Y5S8 564 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 ATP23Q9Y6H3 246 aa10.73□□□□□ -0.69
MSH5-216ENST00000484309 CHD3Q12873 2000 aaKnown RBP10.73□□□□□ -0.69
MSH5-216ENST00000484309 IGHV1-18A0A0C4DH31 117 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 LOC102725191A0A1B0GVB3 256 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 ZNF726A6NNF4 738 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 H7C1Q1 480 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 SMAD7O15105 426 aaKnown RBP10.72□□□□□ -0.69
MSH5-216ENST00000484309 RNF13O43567 381 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 OR5F1O95221 314 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 CD8AP01732 235 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 IFNGR1P15260 489 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 FUT4P22083 530 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 CAPZA2P47755 286 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 PSME3P61289 254 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 SELENOWP63302 87 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 C8orf82Q6P1X6 216 aaPredicted RBP10.72□□□□□ -0.69
MSH5-216ENST00000484309 ANKRD16Q6P6B7 361 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 NHLRC1Q6VVB1 395 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 HACD2Q6Y1H2 254 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 Q71RC1 249 aaPredicted RBP10.72□□□□□ -0.69
MSH5-216ENST00000484309 NANOGNBQ7Z5D8 188 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 PXKQ7Z7A4 578 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 C20orf196Q8IYI0 205 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 CIARTQ8N365 385 aaPredicted RBP10.72□□□□□ -0.69
MSH5-216ENST00000484309 RBM15BQ8NDT2 890 aaKnown RBP10.72□□□□□ -0.69
MSH5-216ENST00000484309 OR6N1Q8NGY5 312 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 HOPXQ9BPY8 73 aaPredicted RBP10.72□□□□□ -0.69
MSH5-216ENST00000484309 TRAF4Q9BUZ4 470 aaPredicted RBP10.72□□□□□ -0.69
MSH5-216ENST00000484309 FKRPQ9H9S5 495 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 C20orf141Q9NUB4 165 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 TAS2R5Q9NYW4 299 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 MOKQ9UQ07 419 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 MGAT4BQ9UQ53 548 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 SNX13Q9Y5W8 968 aa10.72□□□□□ -0.69
MSH5-216ENST00000484309 ZNF503-AS2A6NEH8 195 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 BLOC1S5-TXNDC5H3BN57 136 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 RPL36A-HNRNPH2H7BZ11 118 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 J3KTA2 159 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 NDUFS7O75251 213 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 SERPINA1P01009 418 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 MT-ND1P03886 318 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 HIST1H2ABP04908 130 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 CELA3BP08861 270 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 B4GALT1P15291 398 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 FUT1P19526 365 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 SH3BGRP55822 239 aaPredicted RBP10.71□□□□□ -0.69
MSH5-216ENST00000484309 LSM11P83369 360 aaKnown RBP eCLIP10.71□□□□□ -0.69
MSH5-216ENST00000484309 SLC35D2Q76EJ3 337 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 HIST3H2AQ7L7L0 130 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 MYPOPQ86VE0 399 aaPredicted RBP10.71□□□□□ -0.69
MSH5-216ENST00000484309 MEX3DQ86XN8 651 aaKnown RBP10.71□□□□□ -0.69
MSH5-216ENST00000484309 DEPDC4Q8N2C3 294 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 RNF148Q8N7C7 305 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 TMEM239Q8WW34 195 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 LZICQ8WZA0 190 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 HTRA1Q92743 480 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 HIST1H2ACQ93077 130 aa10.71□□□□□ -0.69
MSH5-216ENST00000484309 FAM162AQ96A26 154 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms