RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 BGLAPP02818 100 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 MT-ND1P03886 318 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 ZNF43P17038 809 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 ITGA2P17301 1181 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 TGFBR3Q03167 851 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 TAB1Q15750 504 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 ANKDD1AQ495B1 522 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 ZNF672Q499Z4 452 aaPredicted RBP8.79□□□□□ -1
CPSF4-213ENST00000484112 MTX3Q5HYI7 312 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 OR7E24Q6IFN5 339 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 DEF8Q6ZN54 512 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 CREB3L2Q70SY1 520 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 FKBP9P1Q75LS8 142 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 TRPM8Q7Z2W7 1104 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 PXKQ7Z7A4 578 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 GPAT4Q86UL3 456 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 CYP4Z1Q86W10 505 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 RBM45Q8IUH3 476 aaKnown RBP8.79□□□□□ -1
CPSF4-213ENST00000484112 DEFB107AQ8IZN7 70 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 RNF113BQ8IZP6 322 aaKnown RBP8.79□□□□□ -1
CPSF4-213ENST00000484112 OFCC1Q8IZS5 231 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 C1orf162Q8NEQ5 155 aaPredicted RBP8.79□□□□□ -1
CPSF4-213ENST00000484112 KBTBD8Q8NFY9 601 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 LIPHQ8WWY8 451 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 KISS1RQ969F8 398 aaPredicted RBP8.79□□□□□ -1
CPSF4-213ENST00000484112 SLC25A36Q96CQ1 311 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 CDRT15Q96T59 188 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 RHNO1Q9BSD3 238 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 PRR14Q9BWN1 585 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 LINC00470Q9BZP3 86 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 MOV10Q9HCE1 1003 aaKnown RBP8.79□□□□□ -1
CPSF4-213ENST00000484112 NGBQ9NPG2 151 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 DCAF13Q9NV06 445 aaKnown RBP8.79□□□□□ -1
CPSF4-213ENST00000484112 ASB6Q9NWX5 421 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 TAS2R16Q9NYV7 291 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 RIMS3Q9UJD0 308 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 ZNF229Q9UJW7 825 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 NOX1Q9Y5S8 564 aa8.79□□□□□ -1
CPSF4-213ENST00000484112 ANK3Q12955 4377 aaKnown RBP8.79□□□□□ -1
CPSF4-213ENST00000484112 M0R082 166 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 PDLIM1O00151 329 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 HAX1O00165 279 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 RAMP1O60894 148 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 ZNF682O95780 498 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 ADAP00813 363 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 THY1P04216 161 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 NQO1P15559 274 aaKnown RBP8.78□□□□□ -1
CPSF4-213ENST00000484112 HOXB6P17509 224 aaKnown RBP8.78□□□□□ -1
CPSF4-213ENST00000484112 GRPRP30550 384 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 OR1E2P47887 323 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 SLC25A3Q00325 362 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 BSPH1Q075Z2 132 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 PUDPQ08623 228 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 ZP4Q12836 540 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 ZNF74Q16587 644 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 PGGHGQ32M88 737 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 TIMM23BQ5SRD1 257 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 CASP12Q6UXS9 341 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 AAED1Q7RTV5 226 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 UEVLDQ8IX04 471 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 C17orf78Q8N4C9 275 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 ZIC4Q8N9L1 334 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 OR5J2Q8NH18 312 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 ZNF417Q8TAU3 575 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 TMEM239Q8WW34 195 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 HSH2DQ96JZ2 352 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 ADAD1Q96M93 576 aaKnown RBP8.78□□□□□ -1
CPSF4-213ENST00000484112 ZNF587Q96SQ5 575 aaPredicted RBP8.78□□□□□ -1
CPSF4-213ENST00000484112 KCNK17Q96T54 332 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 PRSS27Q9BQR3 290 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 AMBRA1Q9C0C7 1298 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 NANSQ9NR45 359 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 CISD1Q9NZ45 108 aaKnown RBP8.78□□□□□ -1
CPSF4-213ENST00000484112 UPB1Q9UBR1 384 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 A4GNTQ9UNA3 340 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 MED31Q9Y3C7 131 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 SNX13Q9Y5W8 968 aa8.78□□□□□ -1
CPSF4-213ENST00000484112 SONP18583 2426 aaKnown RBP8.78□□□□□ -1
CPSF4-213ENST00000484112 CR1P17927 2039 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 IGHV4-30-2A0A087WSY4 118 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 DPRXA6NFQ7 191 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 OR6A2O95222 327 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 F12P00748 615 aaPredicted RBP8.77□□□□□ -1.01
CPSF4-213ENST00000484112 HIST1H2ABP04908 130 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 ASAH2BP0C7U1 165 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 FAM157CP0CG43 387 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 RHCEP18577 417 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 MPGP29372 298 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 SH3BGRP55822 239 aaPredicted RBP8.77□□□□□ -1.01
CPSF4-213ENST00000484112 PMS2P3Q13401 168 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 PIN1Q13526 163 aaPredicted RBP8.77□□□□□ -1.01
CPSF4-213ENST00000484112 C1DQ13901 141 aaKnown RBP8.77□□□□□ -1.01
CPSF4-213ENST00000484112 TRAM2Q15035 370 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 STK11Q15831 433 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 C6orf52Q5T4I8 152 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 WDR88Q6ZMY6 472 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 HIST3H2AQ7L7L0 130 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 BHLHA15Q7RTS1 189 aaPredicted RBP8.77□□□□□ -1.01
CPSF4-213ENST00000484112 HDDC2Q7Z4H3 204 aa8.77□□□□□ -1.01
CPSF4-213ENST00000484112 VTCN1Q7Z7D3 282 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms