RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CENPEQ02224 2701 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 NCOA6Q14686 2063 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-216ENST00000484087 A0A1B0GTH9 108 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 A0A1W2PPW3 197 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 SLC22A31A6NKX4 558 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 CCRL2O00421 344 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 GNB5O14775 395 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 AIREO43918 545 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 SLC19A2O60779 497 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 NTN1O95631 604 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 PTHP01270 115 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 CRYABP02511 175 aaKnown RBP6.25□□□□□ -1.41
BRCA1-216ENST00000484087 HIST1H2ABP04908 130 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 GP1BBP13224 206 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 FUT1P19526 365 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 PTNP21246 168 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 TCEA1P23193 301 aaKnown RBP6.25□□□□□ -1.41
BRCA1-216ENST00000484087 CXCR1P25024 350 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 PCSK6P29122 969 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 HTR1FP30939 366 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 EVI2BP34910 448 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 RPL4P36578 427 aaKnown RBP6.25□□□□□ -1.41
BRCA1-216ENST00000484087 MAGEA5P43359 124 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 P2RX1P51575 399 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 PRPS1P60891 318 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 EFNB1P98172 346 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 PLGLB1Q02325 96 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 SKP2Q13309 424 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 IRF3Q14653 427 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 CD226Q15762 336 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 INAQ16352 499 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 DGUOKQ16854 277 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 ANKDD1AQ495B1 522 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 HIST3H2AQ7L7L0 130 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 CXXC5Q7LFL8 322 aaKnown RBP6.25□□□□□ -1.41
BRCA1-216ENST00000484087 NUP54Q7Z3B4 507 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF295-AS1Q8N0V1 137 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF441Q8N8Z8 693 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 KBTBD8Q8NFY9 601 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 OR52I1Q8NGK6 324 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 OR5W2Q8NH69 310 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 B4GALNT2Q8NHY0 566 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 TMEM234Q8WY98 164 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 HIST1H2ACQ93077 130 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 SPACA9Q96E40 222 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-216ENST00000484087 CCDC120Q96HB5 630 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 SH3YL1Q96HL8 342 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-216ENST00000484087 JSRP1Q96MG2 331 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-216ENST00000484087 MGLLQ99685 303 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 TTTY12Q9BZ98 90 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 FGF20Q9NP95 211 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-216ENST00000484087 CMC2Q9NRP2 79 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 SDHAF3Q9NRP4 125 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 IL20RAQ9UHF4 553 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 KLHL21Q9UJP4 597 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 SLC5A6Q9Y289 635 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 GPR52Q9Y2T5 361 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 KLF13Q9Y2Y9 288 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-216ENST00000484087 PCDHGB6Q9Y5F9 930 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 CHCHD2Q9Y6H1 151 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-216ENST00000484087 PCNX3Q9H6A9 2034 aa6.25□□□□□ -1.41
BRCA1-216ENST00000484087 FBN2P35556 2912 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 DCHS2Q6V1P9 2916 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 CACNA1CQ13936 2221 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 TRAV27A0A087WT01 109 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 TMEM129A0AVI4 362 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 TRIM64BA6NI03 449 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 LRRC3CA6NJW4 275 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 B4DXG7 233 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 FAM47E-STBD1D6RA91 191 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 CCL21O00585 134 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 BHLHE40O14503 412 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 SCO2O43819 266 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ADAM11O75078 769 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 PTP4A3O75365 173 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 OR7A10O76100 309 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 TPOP07202 933 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 PEPDP12955 493 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF182P17025 639 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 NR4A1P22736 598 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 PSMA1P25786 263 aaKnown RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ACVR2AP27037 513 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 GRNP28799 593 aaKnown RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 HTR3AP46098 478 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 RGS6P49758 472 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 POLR2HP52434 150 aaKnown RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 SUMO3P55854 103 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 RPS7P62081 194 aaKnown RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 TUBA1BP68363 451 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ADORA2A-AS1P86434 159 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF117Q03924 483 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 LGALS3BPQ08380 585 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 C17orf67Q0P5P2 114 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 SPHARQ15513 63 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 CTF1Q16619 201 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 ZNF791Q3KP31 576 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-216ENST00000484087 C4orf17Q53FE4 359 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 AADACL4Q5VUY2 407 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 CBLN3Q6UW01 205 aa6.24□□□□□ -1.41
BRCA1-216ENST00000484087 C5orf46Q6UWT4 87 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms