RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 SFTPDP35247 375 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 NPY4RP50391 375 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 MALLQ13021 153 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 SMAD4Q13485 552 aaKnown RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 AQP6Q13520 282 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 MIDNQ504T8 468 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 SLC35D2Q76EJ3 337 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 LGI3Q8N145 548 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 BVESQ8NE79 360 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 FBXL18Q96ME1 805 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 DUOX1Q9NRD9 1551 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 CLTCQ00610 1675 aaKnown RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 RNASET2O00584 256 aaKnown RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 ADCYAP1R1P41586 468 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 SP2Q02086 613 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 HLXQ14774 488 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 OR5M10Q6IEU7 315 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 MAVSQ7Z434 540 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 FBXO17Q96EF6 278 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 NDUFB11Q9NX14 153 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 STEAP1Q9UHE8 339 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 TMEM218A2RU14 115 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 AQP7P3A6NL99 342 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 M0R1X1 148 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 IRAK2O43187 625 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 PRNPP04156 253 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 OR4Q2P0C623 313 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 RFX2P48378 723 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 SLC10A2Q12908 348 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 PRAMEF19Q5SWL8 479 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 DEFB128Q7Z7B8 93 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 CCDC187A0A096LP49 1063 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 HEXAP06865 529 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 INHBEP58166 350 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 HBA1P69905 142 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 MPEG1Q2M385 716 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 ARFGAP1Q8N6T3 406 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 AKIRIN1Q9H9L7 192 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 ZMAT3Q9HA38 289 aaKnown RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 SMIM28A0A1B0GU29 152 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 KDM4FA0A1W2PPD8 638 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 PHF1O43189 567 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 TK1P04183 234 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 GSK3AP49840 483 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 ISL1P61371 349 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 MSMO1Q15800 293 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 CLEC20AQ6ZU45 233 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 OR2W3Q7Z3T1 314 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 OR52B4Q8NGK2 314 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 PPP1R1CQ8WVI7 109 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 CASD1Q96PB1 797 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 DNAJC5Q9H3Z4 198 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 LIN7CQ9NUP9 197 aaKnown RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 BTNL2Q9UIR0 455 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 KLRG2A4D1S0 409 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 TMEM212A6NML5 194 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 EIF4EP06730 217 aaKnown RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 ACVRL1P37023 503 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 EVX1P49640 407 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 TMEM65Q6PI78 240 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 GDPD4Q6W3E5 623 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 ARRDC4Q8NCT1 418 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 OR10C1Q96KK4 312 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 MARCH4Q9P2E8 410 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 ARNTLO00327 626 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 B4GALT2O60909 372 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 CLDN1O95832 211 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 TAS2R38P59533 333 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 SRPXP78539 464 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 GBX1Q14549 363 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 THNSL2Q86YJ6 484 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 THAP3Q8WTV1 239 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-207ENST00000483888 TTC9Q92623 222 aa9.54□□□□□ -0.88
COL12A1-207ENST00000483888 LOC100289279A0A1B0GTE1 492 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 LRRC25Q8N386 305 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-207ENST00000483888 PNPLA1Q8N8W4 532 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 OR2AK2Q8NG84 335 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 ABHD5Q8WTS1 349 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 MCHR2Q969V1 340 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 CIB3Q96Q77 187 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-207ENST00000483888 HRASLSQ9HDD0 168 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 XRN1Q8IZH2 1706 aaKnown RBP9.53□□□□□ -0.88
COL12A1-207ENST00000483888 AKAP12Q02952 1782 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 LRP3O75074 770 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 ACRV1P26436 265 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 ECI1P42126 302 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 STK19P49842 368 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-207ENST00000483888 CTF1Q16619 201 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 ZNF738Q8NE65 137 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 OR5B3Q8NH48 314 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 TMEM239Q8WW34 195 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 FAM210BQ96KR6 192 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 SNX22Q96L94 193 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 TRAV27A0A087WT01 109 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 METTL9Q9H1A3 318 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 CLMPQ9H6B4 373 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 MTHFD2LQ9H903 347 aaPredicted RBP9.53□□□□□ -0.88
COL12A1-207ENST00000483888 PAM16Q9Y3D7 125 aa9.53□□□□□ -0.88
COL12A1-207ENST00000483888 HS3ST4Q9Y661 456 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms