RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 COPEO14579 308 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 TRAF3IP2O43734 574 aaPredicted RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF500O60304 480 aaPredicted RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 AHSA1O95433 338 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 PATE4P0C8F1 98 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 B4GALT1P15291 398 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 GATA3P23771 443 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 CHI3L1P36222 383 aaPredicted RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 RAD52P43351 418 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 RPS23P62266 143 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 EGR4Q05215 589 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 CKAP4Q07065 602 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 HNRNPA0Q13151 305 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 RAB39AQ14964 217 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 SLC9A3R2Q15599 337 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 MAPK11Q15759 364 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 CARD17Q5XLA6 110 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 WBP2NLQ6ICG8 309 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF813Q6ZN06 617 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF836Q6ZNA1 936 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 LRRC74BQ6ZQY2 392 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 TRMT10CQ7L0Y3 403 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 RNF130Q86XS8 419 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 VRK2Q86Y07 508 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF584Q8IVC4 421 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 C4orf33Q8N1A6 199 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 PIK3C3Q8NEB9 887 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 DEFB108BQ8NET1 73 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 OR8J2Q8NGG1 315 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 MFSD8Q8NHS3 518 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 FGFBP3Q8TAT2 258 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 TUBGCP3Q96CW5 907 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 KTI12Q96EK9 354 aaPredicted RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 OXGR1Q96P68 337 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 SLC35A5Q9BS91 424 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 MECRQ9BV79 373 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 MTHFD2LQ9H903 347 aaPredicted RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 ZMAT3Q9HA38 289 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 HINT3Q9NQE9 182 aaKnown RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 MMP26Q9NRE1 261 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 SOX21Q9Y651 276 aaPredicted RBP9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 DSPPQ9NZW4 1301 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 PRSS51A0A1B0GVH4 220 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 CLDN25C9JDP6 229 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 NPHS1O60500 1241 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 HPRP00739 348 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 DBIP07108 87 aaKnown RBP9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 FAM153BP0C7A2 387 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 FAM157BP0CG42 384 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 GCH1P30793 250 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 ALDH3A1P30838 453 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 ERVS71-1P61550 626 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 RAB1AP62820 205 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 C1DQ13901 141 aaKnown RBP9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 GNA13Q14344 377 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 MFSD13AQ14CX5 517 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 ARMCX4Q5H9R4 360 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 TMEM154Q6P9G4 183 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 USP51Q70EK9 711 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF440Q8IYI8 595 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 PAQR4Q8N4S7 273 aaPredicted RBP9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 SYT14Q8NB59 555 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 MGARPQ8TDB4 240 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 SLC25A28Q96A46 364 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 EMC6Q9BV81 110 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 DPY30Q9C005 99 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 OR51B6Q9H340 312 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 LEF1Q9UJU2 399 aaPredicted RBP9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 NUP50Q9UKX7 468 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 CHST2Q9Y4C5 530 aa9.23□□□□□ -0.93
SMARCC1-205ENST00000483847 M0R082 166 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 RAB36O95755 333 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 SHBGP04278 402 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 CCL2P13500 99 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 HLA-DOBP13765 273 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 KRT4P19013 534 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 NCF2P19878 526 aaPredicted RBP9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 PCGF2P35227 344 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 RBMXP38159 391 aaKnown RBP9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 COPZ1P61923 177 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 EMX2Q04743 252 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 GLO1Q04760 184 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 CASP8Q14790 479 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 TSTQ16762 297 aaKnown RBP9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 PCGF3Q3KNV8 242 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 COX20Q5RI15 118 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 RGS7BPQ6MZT1 257 aaPredicted RBP9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF627Q7L945 461 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 RETREG3Q86VR2 466 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 JAZF1Q86VZ6 243 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 C1QL4Q86Z23 238 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 C20orf196Q8IYI0 205 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 CLIP4Q8N3C7 705 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 BHLHE22Q8NFJ8 381 aaPredicted RBP9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 OR52P1PQ8NH57 321 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF417Q8TAU3 575 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 STK35Q8TDR2 534 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 WFDC12Q8WWY7 111 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 RAB1CQ92928 201 aa9.22□□□□□ -0.93
SMARCC1-205ENST00000483847 POP5Q969H6 163 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms