RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 HIST3H2AQ7L7L0 130 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 LINGO2Q7L985 606 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 PXKQ7Z7A4 578 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 MAGEE2Q8TD90 523 aaPredicted RBP12.15□□□□□ -0.46
VARS-225ENST00000482996 LZICQ8WZA0 190 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 BCL2L2Q92843 193 aaPredicted RBP12.15□□□□□ -0.46
VARS-225ENST00000482996 HIST1H2ACQ93077 130 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 C18orf12Q96KH6 178 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 Q96MF0 132 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 OR2M2Q96R28 347 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 HOPXQ9BPY8 73 aaPredicted RBP12.15□□□□□ -0.46
VARS-225ENST00000482996 BDH2Q9BUT1 245 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 HEATR1Q9H583 2144 aaKnown RBP12.15□□□□□ -0.46
VARS-225ENST00000482996 GPR35Q9HC97 309 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 MOV10Q9HCE1 1003 aaKnown RBP12.15□□□□□ -0.46
VARS-225ENST00000482996 B3GAT2Q9NPZ5 323 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 NANSQ9NR45 359 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 CMTM6Q9NX76 183 aa12.15□□□□□ -0.46
VARS-225ENST00000482996 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.15□□□□□ -0.46
VARS-225ENST00000482996 NIPBLQ6KC79 2804 aaeCLIP12.15□□□□□ -0.47
VARS-225ENST00000482996 ZFHX3Q15911 3703 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 OVOL3O00110 214 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 KPNA4O00629 521 aaPredicted RBP12.14□□□□□ -0.47
VARS-225ENST00000482996 GSTA4O15217 222 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 SERPINI2O75830 405 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 DCTN3O75935 186 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 OR5F1O95221 314 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 THY1P04216 161 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 ADORA3P0DMS8 318 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 HLA-DOBP13765 273 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 TNFRSF1BP20333 461 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 IFNA8P32881 189 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 ARF1P84077 181 aaKnown RBP12.14□□□□□ -0.47
VARS-225ENST00000482996 LIPEQ05469 1076 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 SPOCK1Q08629 439 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 ZNF74Q16587 644 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 PGGHGQ32M88 737 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 CARD17Q5XLA6 110 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 DTX2Q86UW9 622 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 TSPYL5Q86VY4 417 aaPredicted RBP12.14□□□□□ -0.47
VARS-225ENST00000482996 SLC15A3Q8IY34 581 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 TMEM123Q8N131 208 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 FBXL14Q8N1E6 418 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 CMTM5Q96DZ9 223 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 TPD52L3Q96J77 140 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 LRR1Q96L50 414 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 DHRS9Q9BPW9 319 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 KCNS3Q9BQ31 491 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 ZNF426Q9BUY5 554 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 TRAF4Q9BUZ4 470 aaPredicted RBP12.14□□□□□ -0.47
VARS-225ENST00000482996 GRIP2Q9C0E4 1043 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 CRLF2Q9HC73 371 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 RIMS3Q9UJD0 308 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 ZNF229Q9UJW7 825 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 ATP23Q9Y6H3 246 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 NF1P21359 2839 aa12.14□□□□□ -0.47
VARS-225ENST00000482996 A0A096LPE4 126 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 ARPC4-TTLL3A0A0A6YYG9 625 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 A0A1W2PPZ6 126 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 SLC35F4A4IF30 521 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 E7EQL1 145 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 C11orf98E9PRG8 122 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 M0R3G1 203 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 EBAG9O00559 213 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 INHBBP09529 407 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 THRBP10828 461 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 UMPSP11172 480 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 RBM34P42696 430 aaKnown RBP12.13□□□□□ -0.47
VARS-225ENST00000482996 NUDT2P50583 147 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 FABP6P51161 128 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 SLC7A2P52569 658 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 ETFDHQ16134 617 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 CEACAM16Q2WEN9 425 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 HACD2Q6Y1H2 254 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 PIGWQ7Z7B1 504 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 BIVMQ86UB2 503 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 TREML1Q86YW5 311 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 C20orf196Q8IYI0 205 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 OR6N1Q8NGY5 312 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 SLC38A2Q96QD8 506 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 EMC6Q9BV81 110 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 MED29Q9NX70 200 aa12.13□□□□□ -0.47
VARS-225ENST00000482996 FAM171A2A8MVW0 826 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 H7C1Q1 480 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 RNF13O43567 381 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 TTKP33981 857 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 CDKN1AP38936 164 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 OR1E2P47887 323 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 SELENOWP63302 87 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 ZP4Q12836 540 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 PIN1Q13526 163 aaPredicted RBP12.12□□□□□ -0.47
VARS-225ENST00000482996 CAMK2DQ13557 499 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 ZNF544Q6NX49 715 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 ZNF771Q7L3S4 317 aaPredicted RBP12.12□□□□□ -0.47
VARS-225ENST00000482996 NANOGNBQ7Z5D8 188 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 CCDC36Q8IYA8 594 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 TXNDC15Q96J42 360 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 ADAD1Q96M93 576 aaKnown RBP12.12□□□□□ -0.47
VARS-225ENST00000482996 HS6ST2Q96MM7 605 aa12.12□□□□□ -0.47
VARS-225ENST00000482996 PRSS27Q9BQR3 290 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms