RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 GLCEO94923 617 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 CFDP00746 253 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-220ENST00000482507 RABIFP47224 123 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 EIF2B5Q13144 721 aaKnown RBP13.53□□□□□ -0.24
ATG4B-220ENST00000482507 FZD2Q14332 565 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 POU4F3Q15319 338 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 CD226Q15762 336 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 TOR2AQ5JU69 321 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 SIGIRRQ6IA17 410 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 EXD3Q8N9H8 876 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 Q9N2J8 555 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 MRM2Q9UI43 246 aaKnown RBP13.53□□□□□ -0.24
ATG4B-220ENST00000482507 FOXJ3Q9UPW0 622 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 AUP1Q9Y679 476 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 SPTY2D1-AS1A0A0U1RR47 76 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 A0A1B0GVI7 797 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 RPS10-NUDT3A0A1W2PQS6 291 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 TMEM72A0PK05 275 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 UPK3AO75631 287 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 TMIGD3P0DMS9 266 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-220ENST00000482507 ARPC4P59998 168 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 YPEL5P62699 121 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 FAM122BQ7Z309 247 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 MCATQ8IVS2 390 aaKnown RBP13.53□□□□□ -0.24
ATG4B-220ENST00000482507 LRRC75AQ8NAA5 344 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 DNAAF1Q8NEP3 725 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 CADM4Q8NFZ8 388 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 OR2T35Q8NGX2 323 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 CMTM3Q96MX0 182 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 GPX7Q96SL4 187 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-220ENST00000482507 SEC22CQ9BRL7 303 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 ZNF436Q9C0F3 470 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-220ENST00000482507 NANSQ9NR45 359 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 PTTG3PQ9NZH4 202 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 SCP2D1Q9UJQ7 156 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 V9GY05 133 aa13.53□□□□□ -0.24
ATG4B-220ENST00000482507 FAM221BA6H8Z2 402 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 GABARAPH6UMI1 98 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 H7C1C5 153 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 CLPSP04118 112 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 PSMB1P20618 241 aaKnown RBP13.52□□□□□ -0.24
ATG4B-220ENST00000482507 MST1P26927 711 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 CD38P28907 300 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 RAD52P43351 418 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 LCN6P62502 163 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 IGLV3-21P80748 117 aaPredicted RBP13.52□□□□□ -0.24
ATG4B-220ENST00000482507 LTBQ06643 244 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 EXOSC2Q13868 293 aaKnown RBP13.52□□□□□ -0.24
ATG4B-220ENST00000482507 PRTGQ2VWP7 1150 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 CBLN3Q6UW01 205 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 APOOLQ6UXV4 268 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 CCDC28AQ8IWP9 274 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 SLC35F3Q8IY50 421 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 METTL27Q8N6F8 245 aaPredicted RBP13.52□□□□□ -0.24
ATG4B-220ENST00000482507 SYNPRQ8TBG9 265 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 PHYHIPQ92561 330 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 WDR89Q96FK6 387 aaPredicted RBP13.52□□□□□ -0.24
ATG4B-220ENST00000482507 ACTR6Q9GZN1 396 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 SPRTNQ9H040 489 aaPredicted RBP13.52□□□□□ -0.24
ATG4B-220ENST00000482507 SEMA6CQ9H3T2 930 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 RXFP3Q9NSD7 469 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 FRRS1LQ9P0K9 344 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 EIF3KQ9UBQ5 218 aaKnown RBP13.52□□□□□ -0.24
ATG4B-220ENST00000482507 POMT2Q9UKY4 750 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 OR10H1Q9Y4A9 318 aa13.52□□□□□ -0.24
ATG4B-220ENST00000482507 TP53BP1Q12888 1972 aaPredicted RBP13.52□□□□□ -0.25
ATG4B-220ENST00000482507 ARPC1BO15143 372 aaKnown RBP13.52□□□□□ -0.25
ATG4B-220ENST00000482507 CTNSO60931 367 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 PPM1BO75688 479 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 TNFP01375 233 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 TDGF1P13385 188 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 RNH1P13489 461 aaKnown RBP13.52□□□□□ -0.25
ATG4B-220ENST00000482507 CDK2P24941 298 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 RPS27P42677 84 aaKnown RBP13.52□□□□□ -0.25
ATG4B-220ENST00000482507 SOX2P48431 317 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 P2RX1P51575 399 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 IKZF1Q13422 519 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 ISXQ2M1V0 245 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 COL28A1Q2UY09 1125 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 KLHL26Q53HC5 615 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 LIPNQ5VXI9 398 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 GPR139Q6DWJ6 353 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 STAC2Q6ZMT1 411 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 RBP7Q96R05 134 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 G6PC3Q9BUM1 346 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 OR10A5Q9H207 317 aa13.52□□□□□ -0.25
ATG4B-220ENST00000482507 ZNF275Q9NSD4 429 aaPredicted RBP13.52□□□□□ -0.25
ATG4B-220ENST00000482507 TMEM184BQ9Y519 407 aaPredicted RBP13.52□□□□□ -0.25
ATG4B-220ENST00000482507 MPDZO75970 2070 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 CIB4A0PJX0 185 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 H3BSH0 61 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 PRAMEF2O60811 474 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 KRT33AO76009 404 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 ABHD16AO95870 558 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 F13BP05160 661 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 DCTDP32321 178 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 DHPSP49366 369 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-220ENST00000482507 PUDPQ08623 228 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 IL10RAQ13651 578 aa13.51□□□□□ -0.25
ATG4B-220ENST00000482507 MAMSTRQ6ZN01 415 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms