RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 CADM2Q8N3J6 435 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 KIR3DL3Q8N743 410 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 CCDC63Q8NA47 563 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 OR4A15Q8NGL6 344 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 TRIM44Q96DX7 344 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-224ENST00000481929 DENND2DQ9H6A0 471 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-224ENST00000481929 DECR2Q9NUI1 292 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 UBAP1Q9NZ09 502 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 PURGQ9UJV8 347 aaKnown RBP12.7□□□□□ -0.38
HDAC6-224ENST00000481929 FBXL3Q9UKT7 428 aa12.7□□□□□ -0.38
HDAC6-224ENST00000481929 SLC22A23A1A5C7 686 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 TMEM233B4DJY2 109 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 M0R3G1 203 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 PLIN3O60664 434 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 CLPTM1O96005 669 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 IL7RP16871 459 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 GIPRP48546 466 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 KLF3P57682 345 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-224ENST00000481929 COPZ1P61923 177 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 ZNF362Q5T0B9 420 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-224ENST00000481929 WBP2NLQ6ICG8 309 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 OR4F3Q6IEY1 312 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 FNDC5Q8NAU1 212 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 OR4F5Q8NH21 305 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 MFSD8Q8NHS3 518 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 SLC25A36Q96CQ1 311 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 OXGR1Q96P68 337 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 OR2M2Q96R28 347 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 CITED1Q99966 193 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 DPY30Q9C005 99 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 SAP30LQ9HAJ7 183 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 SLCO1C1Q9NYB5 712 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 LEF1Q9UJU2 399 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-224ENST00000481929 CACNG2Q9Y698 323 aa12.69□□□□□ -0.38
HDAC6-224ENST00000481929 A0A096LPI6 279 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 PRAMEF27A3QJZ7 478 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 RNASET2O00584 256 aaKnown RBP12.68□□□□□ -0.38
HDAC6-224ENST00000481929 NPIPB7O75200 414 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 GPANK1O95872 356 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 CPA3P15088 417 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 UQCRC2P22695 453 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 RAB1AP62820 205 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 ZNF154Q13106 437 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 XKR7Q5GH72 579 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 ZCCHC23Q6ZST2 131 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 RHOUQ7L0Q8 258 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 TMEM123Q8N131 208 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 SYNPRQ8TBG9 265 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 STK35Q8TDR2 534 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 ELMOD3Q96FG2 381 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 TSPAN32Q96QS1 320 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 RBM4BQ9BQ04 359 aaKnown RBP12.68□□□□□ -0.38
HDAC6-224ENST00000481929 MRI1Q9BV20 369 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 SLC38A1Q9H2H9 487 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 MMP26Q9NRE1 261 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 PRDM4Q9UKN5 801 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 POFUT2Q9Y2G5 429 aa12.68□□□□□ -0.38
HDAC6-224ENST00000481929 KMT2CQ8NEZ4 4911 aaKnown RBP12.67□□□□□ -0.38
HDAC6-224ENST00000481929 IGLV3-9A0A075B6K5 115 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 FTCDNL1E5RQL4 147 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 UBL3O95164 117 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 MT-ND5P03915 603 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 ABHD2P08910 425 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 GKN3PP0CG01 181 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 B4GALT1P15291 398 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 RAG2P55895 527 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 SLC3A1Q07837 685 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 CAMK2DQ13557 499 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 RAB39AQ14964 217 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 CHI3L2Q15782 390 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 TSTQ16762 297 aaKnown RBP12.67□□□□□ -0.38
HDAC6-224ENST00000481929 UGT3A2Q3SY77 523 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 C6orf136Q5SQH8 315 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 PHYHD1Q5SRE7 291 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 CARD17Q5XLA6 110 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 OLFML2AQ68BL7 652 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 ZNF627Q7L945 461 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 ZNF572Q7Z3I7 529 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-224ENST00000481929 CNPY4Q8N129 248 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 ANKFN1Q8N957 763 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 IFT81Q8WYA0 676 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 CCL17Q92583 94 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 TRNT1Q96Q11 434 aaKnown RBP12.67□□□□□ -0.38
HDAC6-224ENST00000481929 B3GAT2Q9NPZ5 323 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 ZNF224Q9NZL3 707 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 PSMC3IPQ9P2W1 217 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-224ENST00000481929 B3GAT1Q9P2W7 334 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 MARCOQ9UEW3 520 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-224ENST00000481929 TBK1Q9UHD2 729 aa12.67□□□□□ -0.38
HDAC6-224ENST00000481929 HMGN4O00479 90 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 IGHMP01871 453 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 CRYBA1P05813 215 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 DBIP07108 87 aaKnown RBP12.66□□□□□ -0.38
HDAC6-224ENST00000481929 FGF4P08620 206 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 FAM157BP0CG42 384 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 G6PDP11413 515 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 ZNF250P15622 560 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 ZNF12P17014 697 aa12.66□□□□□ -0.38
HDAC6-224ENST00000481929 RPS4Y1P22090 263 aaKnown RBP12.66□□□□□ -0.38
HDAC6-224ENST00000481929 CHI3L1P36222 383 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms