RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 RCE1Q9Y256 329 aa11.25□□□□□ -0.61
ABCF3-215ENST00000481116 GMNCA6NCL1 334 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 TRIM64A6NGJ6 449 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 TRIM64BA6NI03 449 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 OR6C65A6NJZ3 312 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 RPL36A-HNRNPH2H7BZ11 118 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 OVOL3O00110 214 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 NDUFS7O75251 213 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 WNT11O96014 354 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 MT-ATP6P00846 226 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 IFNA14P01570 189 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 UMPSP11172 480 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 YAP1P46937 504 aaKnown RBP11.24□□□□□ -0.61
ABCF3-215ENST00000481116 GSK3BP49841 420 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 ATP5J2P56134 94 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 GNGT1P63211 74 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 SELENOWP63302 87 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 KLHL24Q6TFL4 600 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 SSX8Q7RTT4 187 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 SLC46A3Q7Z3Q1 461 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 VTCN1Q7Z7D3 282 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 CPLX4Q7Z7G2 160 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 PIK3C3Q8NEB9 887 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 GTPBP3Q969Y2 492 aaKnown RBP11.24□□□□□ -0.61
ABCF3-215ENST00000481116 MPP4Q96JB8 637 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 RADILQ96JH8 1075 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 ZNF426Q9BUY5 554 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 TRAF4Q9BUZ4 470 aaPredicted RBP11.24□□□□□ -0.61
ABCF3-215ENST00000481116 SEC61A2Q9H9S3 476 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 NANSQ9NR45 359 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 C20orf141Q9NUB4 165 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 ZNF701Q9NV72 531 aaPredicted RBP11.24□□□□□ -0.61
ABCF3-215ENST00000481116 TAS2R5Q9NYW4 299 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 RIMS3Q9UJD0 308 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 MGAT4BQ9UQ53 548 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 SNX13Q9Y5W8 968 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 ATP23Q9Y6H3 246 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 CR1P17927 2039 aa11.24□□□□□ -0.61
ABCF3-215ENST00000481116 IGHV1-18A0A0C4DH31 117 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 ZNF503-AS2A6NEH8 195 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 ATP6V1G2-DDX39BF2Z307 99 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 J3KTA2 159 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 CXCR6O00574 342 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 SMAD7O15105 426 aaKnown RBP11.23□□□□□ -0.61
ABCF3-215ENST00000481116 GSTA4O15217 222 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 PIP5K1CO60331 668 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 IFNGR1P15260 489 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 PAX1P15863 534 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 NCK1P16333 377 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 BIDP55957 195 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 UBE2NP61088 152 aaKnown RBP11.23□□□□□ -0.61
ABCF3-215ENST00000481116 LSM11P83369 360 aaKnown RBP eCLIP11.23□□□□□ -0.61
ABCF3-215ENST00000481116 MELKQ14680 651 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 ANKRD16Q6P6B7 361 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 Q71RC1 249 aaPredicted RBP11.23□□□□□ -0.61
ABCF3-215ENST00000481116 ARPINQ7Z6K5 226 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 PXKQ7Z7A4 578 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 MYPOPQ86VE0 399 aaPredicted RBP11.23□□□□□ -0.61
ABCF3-215ENST00000481116 C20orf196Q8IYI0 205 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 BOD1Q96IK1 185 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 HOPXQ9BPY8 73 aaPredicted RBP11.23□□□□□ -0.61
ABCF3-215ENST00000481116 FKRPQ9H9S5 495 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 RHCGQ9UBD6 479 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 GDF2Q9UK05 429 aaPredicted RBP11.23□□□□□ -0.61
ABCF3-215ENST00000481116 MOKQ9UQ07 419 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 NOX1Q9Y5S8 564 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 CHD3Q12873 2000 aaKnown RBP11.23□□□□□ -0.61
ABCF3-215ENST00000481116 ARFGEF3Q5TH69 2177 aa11.23□□□□□ -0.61
ABCF3-215ENST00000481116 ARPC4-TTLL3A0A0A6YYG9 625 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 ZNF726A6NNF4 738 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 BLOC1S5-TXNDC5H3BN57 136 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 H7C1Q1 480 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 RNF13O43567 381 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 AKAP8O43823 692 aaKnown RBP11.22□□□□□ -0.61
ABCF3-215ENST00000481116 OR5F1O95221 314 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 OR6A2O95222 327 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 ZNF682O95780 498 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 MT-ND1P03886 318 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 HIST1H2ABP04908 130 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 CELA3BP08861 270 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 ASAH2BP0C7U1 165 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 FUT1P19526 365 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 FABP6P51161 128 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 PSME3P61289 254 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 PRSS57Q6UWY2 283 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 HACD2Q6Y1H2 254 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 SLC35D2Q76EJ3 337 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 HIST3H2AQ7L7L0 130 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 MEX3DQ86XN8 651 aaKnown RBP11.22□□□□□ -0.61
ABCF3-215ENST00000481116 DEPDC4Q8N2C3 294 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 RBM15BQ8NDT2 890 aaKnown RBP11.22□□□□□ -0.61
ABCF3-215ENST00000481116 OR6N1Q8NGY5 312 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 TMEM239Q8WW34 195 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 HTRA1Q92743 480 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 HIST1H2ACQ93077 130 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 C18orf12Q96KH6 178 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 SLC38A2Q96QD8 506 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 DHRS9Q9BPW9 319 aa11.22□□□□□ -0.61
ABCF3-215ENST00000481116 NSRP1Q9H0G5 558 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms