RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 TM9SF4Q92544 642 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 RPL3LQ92901 407 aaKnown RBP9.92□□□□□ -0.82
VTI1A-204ENST00000480057 THOC3Q96J01 351 aaKnown RBP9.92□□□□□ -0.82
VTI1A-204ENST00000480057 OR51E2Q9H255 320 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 DCSTAMPQ9H295 470 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 MARCH7Q9H992 704 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 ASCL3Q9NQ33 180 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 TRIM36Q9NQ86 728 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 FAM86C1Q9NVL1 165 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 ASB6Q9NWX5 421 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 BABAM2Q9NXR7 383 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 CCDC59Q9P031 241 aaKnown RBP9.92□□□□□ -0.82
VTI1A-204ENST00000480057 PCNX3Q9H6A9 2034 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 PRSS37A4D1T9 235 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 GJE1A6NN92 205 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 MS4A18H0YCH9 400 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 SLC30A4O14863 429 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 DNPH1O43598 174 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 GPX5O75715 221 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 PMS2P2O95744 297 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 GYPBP06028 91 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 CD1AP06126 327 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 LIPCP11150 499 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 CNR1P21554 472 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 FGF9P31371 208 aaPredicted RBP9.91□□□□□ -0.82
VTI1A-204ENST00000480057 CRYBB2P43320 205 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 SLC35A1P78382 337 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF85Q03923 595 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 TLE3Q04726 772 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 MRPL28Q13084 256 aaKnown RBP9.91□□□□□ -0.82
VTI1A-204ENST00000480057 MYBPHQ13203 477 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 DOC2BQ14184 412 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 OR7A5Q15622 319 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 MOGQ16653 247 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 MS4A18Q3C1V0 323 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 CDONQ4KMG0 1287 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF468Q5VIY5 522 aaPredicted RBP9.91□□□□□ -0.82
VTI1A-204ENST00000480057 B3GNTL1Q67FW5 361 aaPredicted RBP9.91□□□□□ -0.82
VTI1A-204ENST00000480057 SLC16A9Q7RTY1 509 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 SLC35F2Q8IXU6 374 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 BEST3Q8N1M1 668 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 ATP6V1C2Q8NEY4 427 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 TBC1D15Q8TC07 691 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 THAP4Q8WY91 577 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 MIB2Q96AX9 1013 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 ZMYND19Q96E35 227 aaPredicted RBP9.91□□□□□ -0.82
VTI1A-204ENST00000480057 ARL5BQ96KC2 179 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 NPAS1Q99742 590 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 PIGQQ9BRB3 760 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 CHCHD6Q9BRQ6 235 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 ALG12Q9BV10 488 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 RPRD1BQ9NQG5 326 aaKnown RBP9.91□□□□□ -0.82
VTI1A-204ENST00000480057 DKKL1Q9UK85 242 aa9.91□□□□□ -0.82
VTI1A-204ENST00000480057 RPH3AQ9Y2J0 694 aaPredicted RBP9.91□□□□□ -0.82
VTI1A-204ENST00000480057 SF3B6Q9Y3B4 125 aaKnown RBP9.91□□□□□ -0.82
VTI1A-204ENST00000480057 TRDV1A0A1B0GX56 115 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 A0A1W2PQL4 384 aaPredicted RBP9.9□□□□□ -0.82
VTI1A-204ENST00000480057 HSPB2A8KAH6 182 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 VGLL3A8MV65 326 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 CENPBD1B2RD01 187 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 C11orf98E9PRG8 122 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF670-ZNF695F2Z2N8 137 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 LINC01387J3KSC0 135 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 PHYHO14832 338 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 ZIC3O60481 467 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 TFP02787 698 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 HLA-DPB1P04440 258 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 IL11P20809 199 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 AHCYP23526 432 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 CRABP1P29762 137 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 ACVR1BP36896 505 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 RRADP55042 308 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 LSM3P62310 102 aaKnown RBP9.9□□□□□ -0.82
VTI1A-204ENST00000480057 RAC1P63000 192 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 INPP5JQ15735 1006 aaPredicted RBP9.9□□□□□ -0.82
VTI1A-204ENST00000480057 HSPB2Q16082 182 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 LIPKQ5VXJ0 399 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 DNM1P34Q6PK57 102 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 B3GLCTQ6Y288 498 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 TMPPEQ6ZT21 453 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 KCTD20Q7Z5Y7 419 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF227Q86WZ6 799 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 CLEC1AQ8NC01 280 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 ZPLD1Q8TCW7 415 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 KCNE4Q8WWG9 221 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 ASB10Q8WXI3 467 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 TIMP4Q99727 224 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 UTP23Q9BRU9 249 aaKnown RBP9.9□□□□□ -0.82
VTI1A-204ENST00000480057 CENPOQ9BU64 300 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 MED18Q9BUE0 208 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 OR2B2Q9GZK3 357 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 RNF32Q9H0A6 362 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 MMP27Q9H306 513 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 STMN3Q9NZ72 180 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 IL17BQ9UHF5 180 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 BOKQ9UMX3 212 aaPredicted RBP9.9□□□□□ -0.82
VTI1A-204ENST00000480057 GSTK1Q9Y2Q3 226 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 MRPS18BQ9Y676 258 aaKnown RBP9.9□□□□□ -0.82
VTI1A-204ENST00000480057 TMEM14AQ9Y6G1 99 aa9.9□□□□□ -0.82
VTI1A-204ENST00000480057 LOC100506127A0A0U1RQW1 187 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms