RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 TEX47Q8TBZ9 253 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 TAAR8Q969N4 342 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 DDIT4LQ96D03 193 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 ARL5BQ96KC2 179 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 SAMD8Q96LT4 415 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 CNBD2Q96M20 576 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 SFXN2Q96NB2 322 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 MOGAT1Q96PD6 335 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 PIGQQ9BRB3 760 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 POTEKPQ9BYX7 375 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 OR52D1Q9H346 318 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 TMEM185BQ9H7F4 350 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 FKRPQ9H9S5 495 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 SERINC1Q9NRX5 453 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 TBC1D23Q9NUY8 699 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 QPCTLQ9NXS2 382 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 IL20Q9NYY1 176 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 ZNF229Q9UJW7 825 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 RPH3AQ9Y2J0 694 aaPredicted RBP5.97□□□□□ -1.45
USP48-208ENST00000479177 ZNF337Q9Y3M9 751 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 GMPPBQ9Y5P6 360 aa5.97□□□□□ -1.45
USP48-208ENST00000479177 SPIN1Q9Y657 262 aaPredicted RBP5.97□□□□□ -1.45
USP48-208ENST00000479177 NBASA2RRP1 2371 aa5.96□□□□□ -1.45
USP48-208ENST00000479177 LIPT2A6NK58 231 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 H3BML4 177 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 H3BN98 237 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 K7EM74 188 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 M0R129 80 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 ACOT7O00154 380 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 PTP4A3O75365 173 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 NDUFB2O95178 105 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 RCBTB2O95199 551 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 TSPAN19P0C672 248 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 TFPIP10646 304 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 BMP7P18075 431 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 FKBP2P26885 142 aaKnown RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 GRPRP30550 384 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 UQCRC1P31930 480 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 IDUAP35475 653 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 MAGEA5P43359 124 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 CLK1P49759 484 aaKnown RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 RPS6KA3P51812 740 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 NUP107P57740 925 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 PPIAP62937 165 aaKnown RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 CXADRP78310 365 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 CDK5Q00535 292 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 PMP22Q01453 160 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 MYBPHQ13203 477 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 LSAMPQ13449 338 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 MED21Q13503 144 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 GINS1Q14691 196 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 ZNF169Q14929 603 aaPredicted RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 PDK3Q15120 406 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 PTGES3Q15185 160 aaKnown RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 SGCBQ16585 318 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 CTU2Q2VPK5 515 aaKnown RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 PGGHGQ32M88 737 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 ZBED5Q49AG3 693 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 CLEC12AQ5QGZ9 265 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 RPL13AP3Q6NVV1 102 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 SMARCD3Q6STE5 483 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 Q6ZS92 163 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 TRILQ7L0X0 811 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 MAMDC2Q7Z304 686 aaPredicted RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 NANOGNBQ7Z5D8 188 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 OAFQ86UD1 273 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 SLC22A16Q86VW1 577 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 C8orf59Q8N0T1 100 aaPredicted RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 SLC43A2Q8N370 569 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 FAM109AQ8N4B1 249 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 FAM26EQ8N5C1 309 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 C10orf53Q8N6V4 93 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 RBMXL3Q8N7X1 1067 aaKnown RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 SCAIQ8N9R8 606 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 LRRC75AQ8NAA5 344 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 SETD9Q8NE22 299 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 ATP6V1C2Q8NEY4 427 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 OR52L1Q8NGH7 329 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 OR4Q3Q8NH05 313 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 OR51A7Q8NH64 312 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 MFSD8Q8NHS3 518 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 FAM81AQ8TBF8 368 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 OSTF1Q92882 214 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 EXTL1Q92935 676 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 DACT3Q96B18 629 aaPredicted RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 DNAJA3Q96EY1 480 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 MUS81Q96NY9 551 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 TNFRSF13CQ96RJ3 184 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 GPX7Q96SL4 187 aaPredicted RBP5.96□□□□□ -1.46
USP48-208ENST00000479177 JAM3Q9BX67 310 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 TSSK6Q9BXA6 273 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 SLC6A15Q9H2J7 730 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 ADNPQ9H2P0 1102 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 ZDHHC11Q9H8X9 412 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 NANSQ9NR45 359 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 ALKBH4Q9NXW9 302 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 UBAP1Q9NZ09 502 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 SEC14L4Q9UDX3 406 aa5.96□□□□□ -1.46
USP48-208ENST00000479177 IL20RAQ9UHF4 553 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms