RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 MBOAT2Q6ZWT7 520 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 ZNF627Q7L945 461 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 HDDC2Q7Z4H3 204 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 OR6X1Q8NH79 312 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 BPIFA2Q96DR5 249 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 ASB9Q96DX5 294 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 OR2M2Q96R28 347 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 ZNF347Q96SE7 839 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 TMEM204Q9BSN7 226 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 MAGIXQ9H6Y5 334 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 PLEKHF2Q9H8W4 249 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 STX18Q9P2W9 335 aaKnown RBP13.61□□□□□ -0.23
C9orf3-217ENST00000479161 TMEM5Q9Y2B1 443 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 HIF3AQ9Y2N7 669 aa13.61□□□□□ -0.23
C9orf3-217ENST00000479161 MAGED1Q9Y5V3 778 aaPredicted RBP13.61□□□□□ -0.23
C9orf3-217ENST00000479161 A0A087WUU8 490 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 CIB4A0PJX0 185 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 J3KTA2 159 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 ATP5HO75947 161 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 UBOX5O94941 541 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 IGHV3-9P01782 118 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 H1F0P07305 194 aaKnown RBP13.6□□□□□ -0.23
C9orf3-217ENST00000479161 CBLP22681 906 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 DNAJA1P31689 397 aaKnown RBP13.6□□□□□ -0.23
C9orf3-217ENST00000479161 RPS4XP62701 263 aaKnown RBP13.6□□□□□ -0.23
C9orf3-217ENST00000479161 VLDLRP98155 873 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 POU3F1Q03052 451 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-217ENST00000479161 PPA1Q15181 289 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 ADAM5Q6NVV9 412 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 NANOGNBQ7Z5D8 188 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 CCDC36Q8IYA8 594 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 C20orf196Q8IYI0 205 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 CDK20Q8IZL9 346 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 LRRC17Q8N6Y2 441 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 FAM86B1Q8N7N1 296 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 FAM169BQ8N8A8 192 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 SLC7A13Q8TCU3 470 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 MCUR1Q96AQ8 359 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 PIP5K1AQ99755 562 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 ESRP2Q9H6T0 727 aaKnown RBP13.6□□□□□ -0.23
C9orf3-217ENST00000479161 C20orf141Q9NUB4 165 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-217ENST00000479161 AMDHD2Q9Y303 409 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 SLC25A15Q9Y619 301 aa13.6□□□□□ -0.23
C9orf3-217ENST00000479161 RAI1Q7Z5J4 1906 aaPredicted RBP13.6□□□□□ -0.23
C9orf3-217ENST00000479161 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-217ENST00000479161 SLC35F4A4IF30 521 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 ZNF726A6NNF4 738 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 KPNA4O00629 521 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-217ENST00000479161 MGRN1O60291 552 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 KRT33AO76009 404 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 HLA-DOBP13765 273 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 AHCYP23526 432 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 MSX2P35548 267 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-217ENST00000479161 MAGEA2P43356 314 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 RASSF2P50749 326 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 HMGA2P52926 109 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 BNIP1Q12981 228 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 C3orf36Q3SXR2 165 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 PGM2L1Q6PCE3 622 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 RRM2BQ7LG56 351 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.59□□□□□ -0.23
C9orf3-217ENST00000479161 DHFR2Q86XF0 187 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 GPR137CQ8N3F9 429 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 PFN4Q8NHR9 129 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 SLC7A6OSQ96CW6 309 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-217ENST00000479161 SLC25A44Q96H78 314 aaPredicted RBP13.59□□□□□ -0.23
C9orf3-217ENST00000479161 RADILQ96JH8 1075 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 SEPHS2Q99611 448 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 BTBD10Q9BSF8 475 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 FUZQ9BT04 418 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 SLC17A5Q9NRA2 495 aa13.59□□□□□ -0.23
C9orf3-217ENST00000479161 DSCAMO60469 2012 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 ARPC4-TTLL3A0A0A6YYG9 625 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 TCRBV5S2A0A599 114 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 ACOT8O14734 319 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 GYG2O15488 501 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 RNF13O43567 381 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 TMCC2O75069 709 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 UPK3AO75631 287 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 KRT36O76013 467 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 FABP3P05413 133 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 UMPSP11172 480 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 IFI30P13284 250 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 YAP1P46937 504 aaKnown RBP13.58□□□□□ -0.24
C9orf3-217ENST00000479161 PRPS1P60891 318 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 RPL18Q07020 188 aaKnown RBP13.58□□□□□ -0.24
C9orf3-217ENST00000479161 TSC22D1Q15714 1073 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 NCMAPQ5T1S8 102 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 FBXW10Q5XX13 1052 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 HMBOX1Q6NT76 420 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 ANKRD16Q6P6B7 361 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 ZNF730Q6ZMV8 503 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 SLC35D2Q76EJ3 337 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 NRMQ8IXM6 262 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 MBD6Q96DN6 1003 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 ZC3HAV1LQ96H79 300 aaKnown RBP13.58□□□□□ -0.24
C9orf3-217ENST00000479161 GPR35Q9HC97 309 aa13.58□□□□□ -0.24
C9orf3-217ENST00000479161 KRCC1Q9NPI7 259 aaPredicted RBP13.58□□□□□ -0.24
C9orf3-217ENST00000479161 B3GAT2Q9NPZ5 323 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms