RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 CDKN2AP42771 156 aaKnown RBP11.65□□□□□ -0.54
CHD3-210ENST00000479080 LCN6P62502 163 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 SLC35F1Q5T1Q4 408 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 WLSQ5T9L3 541 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 SLC27A4Q6P1M0 643 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 NCCRP1Q6ZVX7 275 aaPredicted RBP11.65□□□□□ -0.54
CHD3-210ENST00000479080 CREB3L2Q70SY1 520 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 SLC35D2Q76EJ3 337 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 BCDIN3DQ7Z5W3 292 aaKnown RBP11.65□□□□□ -0.54
CHD3-210ENST00000479080 PXKQ7Z7A4 578 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 DOLPP1Q86YN1 238 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 PM20D2Q8IYS1 436 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 ENTHD1Q8IYW4 607 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 SLC43A2Q8N370 569 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 MARVELD2Q8N4S9 558 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 OR2T33Q8NG76 320 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 HDAC2Q92769 488 aaKnown RBP11.65□□□□□ -0.54
CHD3-210ENST00000479080 ZNF775Q96BV0 537 aaPredicted RBP11.65□□□□□ -0.54
CHD3-210ENST00000479080 MUS81Q96NY9 551 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 ERMAPQ96PL5 475 aaPredicted RBP11.65□□□□□ -0.54
CHD3-210ENST00000479080 TRIB1Q96RU8 372 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 NAA11Q9BSU3 229 aaPredicted RBP11.65□□□□□ -0.54
CHD3-210ENST00000479080 EMC6Q9BV81 110 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 HCAR1Q9BXC0 346 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 ANKRD60Q9BZ19 345 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 TXNIPQ9H3M7 391 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 RNF122Q9H9V4 155 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 LRRC42Q9Y546 428 aa11.65□□□□□ -0.54
CHD3-210ENST00000479080 IGKV1D-43A0A0B4J1Z2 117 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 SLC22A20A6NK97 555 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 NOS3P29474 1203 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 SDHAP31040 664 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 SMSP52788 366 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 RPL27P61353 136 aaKnown RBP11.64□□□□□ -0.55
CHD3-210ENST00000479080 ISL1P61371 349 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 CD47Q08722 323 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 KRR1Q13601 381 aaKnown RBP11.64□□□□□ -0.55
CHD3-210ENST00000479080 PDK3Q15120 406 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 PHYHD1Q5SRE7 291 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 C1orf185Q5T7R7 199 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 NSUN5P2Q63ZY6 315 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 ZNF585AQ6P3V2 769 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 C3P1Q6ZMU1 363 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 GPAT4Q86UL3 456 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 UEVLDQ8IX04 471 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 TMEM123Q8N131 208 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 SLC37A3Q8NCC5 494 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 NAXEQ8NCW5 288 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 NPEPL1Q8NDH3 523 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 ST6GALNAC3Q8NDV1 305 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 SDR9C7Q8NEX9 313 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 ANKK1Q8NFD2 765 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 OR52L1Q8NGH7 329 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 FAM81AQ8TBF8 368 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 FBLIM1Q8WUP2 373 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 ZNRF4Q8WWF5 429 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 NMD3Q96D46 503 aaKnown RBP11.64□□□□□ -0.55
CHD3-210ENST00000479080 ZHX1-C8orf76Q96EF9 292 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 SF3B5Q9BWJ5 86 aaKnown RBP11.64□□□□□ -0.55
CHD3-210ENST00000479080 FN3KQ9H479 309 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 BCO1Q9HAY6 547 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 HINT3Q9NQE9 182 aaKnown RBP11.64□□□□□ -0.55
CHD3-210ENST00000479080 CMC2Q9NRP2 79 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 PAQR5Q9NXK6 330 aaPredicted RBP11.64□□□□□ -0.55
CHD3-210ENST00000479080 TVP23BQ9NYZ1 205 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 UBAP1Q9NZ09 502 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 TINAGQ9UJW2 476 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 RAB26Q9ULW5 256 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 GPR52Q9Y2T5 361 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 GMPPBQ9Y5P6 360 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 NOX1Q9Y5S8 564 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 KALRNO60229 2985 aa11.64□□□□□ -0.55
CHD3-210ENST00000479080 SETXQ7Z333 2677 aaKnown RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 ZFYVE26Q68DK2 2539 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 FAM208BQ5VWN6 2430 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 MBD3L4A6NDZ8 208 aaPredicted RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 MBD3L3A6NE82 208 aaPredicted RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 MBD3L5A6NJ08 208 aaPredicted RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 CD8B2A6NJW9 211 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 AHRRA9YTQ3 701 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 SLC19A2O60779 497 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 WBP4O75554 376 aaKnown RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 VAMP5O95183 116 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 OR6A2O95222 327 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 SYNGR4O95473 234 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 ABOP16442 354 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 MYF6P23409 242 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 HSPA13P48723 471 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 PCYT1AP49585 367 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 SELENOPP49908 381 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 BIDP55957 195 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 CLDN17P56750 224 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 MYBPC1Q00872 1141 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 LGALS3BPQ08380 585 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 RASGEF1BQ0VAM2 473 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 CRMP1Q14194 572 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 MAD2L1BPQ15013 274 aaPredicted RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 SOWAHCQ53LP3 525 aaPredicted RBP11.63□□□□□ -0.55
CHD3-210ENST00000479080 EEF1A1P5Q5VTE0 462 aa11.63□□□□□ -0.55
CHD3-210ENST00000479080 TTC23Q5W5X9 447 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms