RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 POU3F1Q03052 451 aaPredicted RBP12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 LGALS3BPQ08380 585 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 PUDPQ08623 228 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 RBBP4Q09028 425 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 PMS2P3Q13401 168 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 CYP51A1Q16850 503 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 MST1LQ2TV78 715 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 AGKQ53H12 422 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 BEND6Q5SZJ8 279 aaPredicted RBP12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 TUBA1AQ71U36 451 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 KDM8Q8N371 416 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 C11orf65Q8NCR3 313 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 STON2Q8WXE9 905 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 TAAR8Q969N4 342 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 TMEM43Q9BTV4 400 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 ULBP2Q9BZM5 246 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 SLC25A37Q9NYZ2 338 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 LEF1Q9UJU2 399 aaPredicted RBP12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 POFUT2Q9Y2G5 429 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 COL6A5A8TX70 2615 aa12.55□□□□□ -0.4
SMARCE1-209ENST00000478349 ABCA1O95477 2261 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 CHD3Q12873 2000 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 A0A0B4J2E0 115 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 LOC100289279A0A1B0GTE1 492 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 A0A1B0GX12 115 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 VWC2LB2RUY7 222 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 hCG_2039718K7EN88 272 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 M0R3G1 203 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 ANGPT2O15123 496 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 OR6A2O95222 327 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 RAB36O95755 333 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 SRD5A1P18405 259 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 HTR2AP28223 471 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 DAG1Q14118 895 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 GSG1Q2KHT4 349 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 REP15Q6BDI9 236 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 ZNF613Q6PF04 617 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 LINGO2Q7L985 606 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 SPATA21Q7Z572 469 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 TMEM123Q8N131 208 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 OR6N1Q8NGY5 312 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 SLC41A3Q96GZ6 507 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 ATP6V1G3Q96LB4 118 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 NELFAQ9H3P2 528 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 MRGBPQ9NV56 204 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 MRPL39Q9NYK5 338 aaKnown RBP12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 VAPAQ9P0L0 249 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 CMAHPQ9Y471 501 aa12.54□□□□□ -0.4
SMARCE1-209ENST00000478349 STAB1Q9NY15 2570 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 IGKV1D-42A0A075B6H8 117 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 IGHV2OR16-5A0A0B4J2B6 119 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 LY6HO94772 140 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 CD79AP11912 226 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 ZNF23P17027 643 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 PCMT1P22061 227 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 AQP1P29972 269 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 GALK2Q01415 458 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 SNTB2Q13425 540 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 OR1Q1Q15612 314 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 TRMT5Q32P41 509 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 INTS11Q5TA45 600 aaKnown RBP12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 CARD17Q5XLA6 110 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 ZNF813Q6ZN06 617 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 PXKQ7Z7A4 578 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 DHDDSQ86SQ9 333 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 MDP1Q86V88 176 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 FUNDC1Q8IVP5 155 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 MSRB3Q8IXL7 192 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 C20orf196Q8IYI0 205 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 ANKS4BQ8N8V4 417 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 RASSF5Q8WWW0 418 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 SIKE1Q9BRV8 207 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 SLCO1B3Q9NPD5 702 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 SEC14L4Q9UDX3 406 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 FBN3Q75N90 2809 aa12.53□□□□□ -0.4
SMARCE1-209ENST00000478349 TRBV5-3A0A0A0MS03 114 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 PHF1O43189 567 aaPredicted RBP12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 CHP2O43745 196 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 UBL3O95164 117 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 DAOP14920 347 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 CBLP22681 906 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 AHCYP23526 432 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 CALCRP30988 508 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 THBS4P35443 961 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 CSNK1A1P48729 337 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 EVX1P49640 407 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 CHN2P52757 468 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 PAGE3Q5JUK9 113 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 GKAP1Q5VSY0 366 aaPredicted RBP12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 HDDC2Q7Z4H3 204 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 DPPA2Q7Z7J5 298 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 PATL1Q86TB9 770 aaKnown RBP12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 SVOPLQ8N434 492 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 OR5J2Q8NH18 312 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 SLC26A7Q8TE54 656 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 TSPEARQ8WU66 669 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 CKAP2Q8WWK9 683 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 HPS1Q92902 700 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 FOXN4Q96NZ1 517 aa12.52□□□□□ -0.41
SMARCE1-209ENST00000478349 EBF4Q9BQW3 602 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms