RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 MDKP21741 143 aaPredicted RBP9.01□□□□□ -0.97
APTX-222ENST00000478279 RPS4Y1P22090 263 aaKnown RBP9.01□□□□□ -0.97
APTX-222ENST00000478279 LSP1P33241 339 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 SELENOVP59797 346 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 COPZ1P61923 177 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 RAB1AP62820 205 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 C1DQ13901 141 aaKnown RBP9.01□□□□□ -0.97
APTX-222ENST00000478279 PCLAFQ15004 111 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 ALKBH6Q3KRA9 238 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 LEG1Q6P5S2 330 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 TMEM154Q6P9G4 183 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 ZNF627Q7L945 461 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 ANKRD46Q86W74 232 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 TMEM123Q8N131 208 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 BCL6BQ8N143 479 aaPredicted RBP9.01□□□□□ -0.97
APTX-222ENST00000478279 ANKFN1Q8N957 763 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 RAB1CQ92928 201 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 SLC25A36Q96CQ1 311 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 TIMD4Q96H15 378 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 ZNF48Q96MX3 618 aaPredicted RBP9.01□□□□□ -0.97
APTX-222ENST00000478279 OR2M2Q96R28 347 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 PKP2Q99959 881 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 RLIMQ9NVW2 624 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 PLEK2Q9NYT0 353 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 B3GAT1Q9P2W7 334 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 MARCOQ9UEW3 520 aaPredicted RBP9.01□□□□□ -0.97
APTX-222ENST00000478279 SLC7A8Q9UHI5 535 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 MMP24Q9Y5R2 645 aa9.01□□□□□ -0.97
APTX-222ENST00000478279 IGHV1-69-2A0A0G2JMI3 117 aa9□□□□□ -0.97
APTX-222ENST00000478279 CDHR4A6H8M9 788 aa9□□□□□ -0.97
APTX-222ENST00000478279 M0R3G1 203 aa9□□□□□ -0.97
APTX-222ENST00000478279 COPEO14579 308 aa9□□□□□ -0.97
APTX-222ENST00000478279 TRAF3IP2O43734 574 aaPredicted RBP9□□□□□ -0.97
APTX-222ENST00000478279 AKAP8O43823 692 aaKnown RBP9□□□□□ -0.97
APTX-222ENST00000478279 NPHS1O60500 1241 aa9□□□□□ -0.97
APTX-222ENST00000478279 RAB36O95755 333 aa9□□□□□ -0.97
APTX-222ENST00000478279 CLPTM1O96005 669 aa9□□□□□ -0.97
APTX-222ENST00000478279 GTF2E2P29084 291 aaKnown RBP9□□□□□ -0.97
APTX-222ENST00000478279 CHI3L1P36222 383 aaPredicted RBP9□□□□□ -0.97
APTX-222ENST00000478279 GIPRP48546 466 aa9□□□□□ -0.97
APTX-222ENST00000478279 PTDSS1P48651 473 aaKnown RBP9□□□□□ -0.97
APTX-222ENST00000478279 ATP4BP51164 291 aa9□□□□□ -0.97
APTX-222ENST00000478279 LCN2P80188 198 aa9□□□□□ -0.97
APTX-222ENST00000478279 EMX2Q04743 252 aa9□□□□□ -0.97
APTX-222ENST00000478279 MAD2L1Q13257 205 aaPredicted RBP9□□□□□ -0.97
APTX-222ENST00000478279 ARMCX4Q5H9R4 360 aa9□□□□□ -0.97
APTX-222ENST00000478279 PHYHD1Q5SRE7 291 aa9□□□□□ -0.97
APTX-222ENST00000478279 RGS7BPQ6MZT1 257 aaPredicted RBP9□□□□□ -0.97
APTX-222ENST00000478279 SYT10Q6XYQ8 523 aa9□□□□□ -0.97
APTX-222ENST00000478279 ZNF813Q6ZN06 617 aa9□□□□□ -0.97
APTX-222ENST00000478279 USP51Q70EK9 711 aa9□□□□□ -0.97
APTX-222ENST00000478279 WDFY1Q8IWB7 410 aa9□□□□□ -0.97
APTX-222ENST00000478279 C20orf196Q8IYI0 205 aa9□□□□□ -0.97
APTX-222ENST00000478279 DEFB108BQ8NET1 73 aa9□□□□□ -0.97
APTX-222ENST00000478279 VPS37AQ8NEZ2 397 aa9□□□□□ -0.97
APTX-222ENST00000478279 AGR3Q8TD06 166 aa9□□□□□ -0.97
APTX-222ENST00000478279 SNX33Q8WV41 574 aa9□□□□□ -0.97
APTX-222ENST00000478279 TAF15Q92804 592 aaKnown RBP eCLIP9□□□□□ -0.97
APTX-222ENST00000478279 TMIGD2Q96BF3 282 aa9□□□□□ -0.97
APTX-222ENST00000478279 TUBGCP3Q96CW5 907 aa9□□□□□ -0.97
APTX-222ENST00000478279 GAL3ST1Q99999 423 aa9□□□□□ -0.97
APTX-222ENST00000478279 PTDSS2Q9BVG9 487 aa9□□□□□ -0.97
APTX-222ENST00000478279 ZNF224Q9NZL3 707 aa9□□□□□ -0.97
APTX-222ENST00000478279 FBXL3Q9UKT7 428 aa9□□□□□ -0.97
APTX-222ENST00000478279 POFUT2Q9Y2G5 429 aa9□□□□□ -0.97
APTX-222ENST00000478279 IGLV3-9A0A075B6K5 115 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 LOC102725191A0A1B0GVB3 256 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 SLC22A23A1A5C7 686 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 AIM2O14862 343 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 FZD7O75084 574 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 FOXH1O75593 365 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 C1QCP02747 245 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 ZNF250P15622 560 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 KLF3P57682 345 aaPredicted RBP8.99□□□□□ -0.97
APTX-222ENST00000478279 EGR4Q05215 589 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 CASP8Q14790 479 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 RAB39AQ14964 217 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 MFSD13AQ14CX5 517 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 SLC9A3R2Q15599 337 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 CHI3L2Q15782 390 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 HFEQ30201 348 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 KLF17Q5JT82 389 aaPredicted RBP8.99□□□□□ -0.97
APTX-222ENST00000478279 ANXA8L1Q5VT79 327 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 ATG16L1Q676U5 607 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 RNF130Q86XS8 419 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 PEX5LQ8IYB4 626 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 GLB1L3Q8NCI6 653 aaPredicted RBP8.99□□□□□ -0.97
APTX-222ENST00000478279 SYNPRQ8TBG9 265 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 ST7LQ8TDW4 575 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 LRR1Q96L50 414 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 SLC35A5Q9BS91 424 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 MMP27Q9H306 513 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 ASIC5Q9NY37 505 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 SLCO1C1Q9NYB5 712 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 PDP1Q9P0J1 537 aaPredicted RBP8.99□□□□□ -0.97
APTX-222ENST00000478279 SEC14L4Q9UDX3 406 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 TESQ9UGI8 421 aaKnown RBP8.99□□□□□ -0.97
APTX-222ENST00000478279 LEF1Q9UJU2 399 aaPredicted RBP8.99□□□□□ -0.97
APTX-222ENST00000478279 CACNG2Q9Y698 323 aa8.99□□□□□ -0.97
APTX-222ENST00000478279 A0A1B0GUS0 222 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms