RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 OR7A5Q15622 319 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 TSTQ16762 297 aaKnown RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 GSG1Q2KHT4 349 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 RGS7BPQ6MZT1 257 aaPredicted RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 OLIG3Q7RTU3 272 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF584Q8IVC4 421 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 POU5F2Q8N7G0 328 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 PSMA8Q8TAA3 256 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 SYNPRQ8TBG9 265 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 SNX33Q8WV41 574 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 PHF21AQ96BD5 680 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 ZG16BQ96DA0 208 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 SLC47A1Q96FL8 570 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 OR7D2Q96RA2 312 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 DIRC2Q96SL1 478 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 MRPL57Q9BQC6 102 aaKnown RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 MRPL46Q9H2W6 279 aaKnown RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 BRD7Q9NPI1 651 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 EXOSC3Q9NQT5 275 aaKnown RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF224Q9NZL3 707 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 IL20RAQ9UHF4 553 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 SLC7A8Q9UHI5 535 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 FAF1Q9UNN5 650 aaPredicted RBP6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 SLC35A3Q9Y2D2 325 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 CCL27Q9Y4X3 112 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 NPTNQ9Y639 398 aa6.14□□□□□ -1.43
SPTLC1-205ENST00000477888 F5H0A9 414 aaPredicted RBP6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 AP3D1O14617 1153 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF500O60304 480 aaPredicted RBP6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 TSPAN9O75954 239 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 IGHV1-46P01743 117 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 CHRM4P08173 479 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 KRT16P08779 473 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 STX2P32856 288 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 PTDSS1P48651 473 aaKnown RBP6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 SERPINB8P50452 374 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 PKNOX1P55347 436 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 ERVS71-1P61550 626 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 RAB1AP62820 205 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 KCNJ10P78508 379 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 SLC3A1Q07837 685 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 HNRNPA0Q13151 305 aaKnown RBP6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 TP53BP2Q13625 1128 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 TMEM155Q4W5P6 130 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 FAM209AQ5JX71 171 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 PHYHD1Q5SRE7 291 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 FOXB2Q5VYV0 432 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 LRRN1Q6UXK5 716 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF627Q7L945 461 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 LRRC28Q86X40 367 aaPredicted RBP6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 KLHL7Q8IXQ5 586 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 DDIASQ8IXT1 998 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 KLHL36Q8N4N3 616 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 SPICQ8N5J4 248 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 OR56A1Q8NGH5 318 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 OR5D16Q8NGK9 328 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF519Q8TB69 540 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 MGARPQ8TDB4 240 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 DCAKDQ8WVC6 231 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 SSMEM1Q8WWF3 244 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 GATAD2BQ8WXI9 593 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 NEURL3Q96EH8 262 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 METTL2AQ96IZ6 378 aaKnown RBP6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 TMEM237Q96Q45 408 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF350Q9GZX5 532 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 DENND2DQ9H6A0 471 aaPredicted RBP6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 ADPRHL2Q9NX46 363 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 DCAF16Q9NXF7 216 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 PFDN2Q9UHV9 154 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 RCE1Q9Y256 329 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 RASD1Q9Y272 281 aa6.13□□□□□ -1.43
SPTLC1-205ENST00000477888 HYDINQ4G0P3 5121 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 ZNF816-ZNF321PA0A0X1KG74 233 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 KIR2DS1A0A191URI9 304 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 CLDN24A6NM45 220 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 C3orf84H3BNL1 204 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 TNFRSF13BO14836 293 aaPredicted RBP6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 TM9SF1O15321 606 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 XPNPEP2O43895 674 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 SCN2BO60939 215 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 SEC22BO75396 215 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 BPNT1O95861 308 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 AK1P00568 194 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 IGHV3-13P01766 116 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 SERPINA5P05154 406 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 GUSBP08236 651 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 OR8G3PP0DMU2 310 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 IMPDH1P20839 514 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 PRPH2P23942 346 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 IER3P46695 156 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 MMP15P51511 669 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 AQP5P55064 265 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 CLDN17P56750 224 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 EGR3Q06889 387 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 MPP2Q14168 576 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 RAB39AQ14964 217 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 MOGQ16653 247 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 IMPG1Q17R60 797 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 ARHGAP11BQ3KRB8 267 aa6.12□□□□□ -1.43
SPTLC1-205ENST00000477888 SPRNQ5BIV9 151 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms