RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TXNL4AP83876 142 aaKnown RBP17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 CASP8Q14790 479 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 NKPD1Q17RQ9 610 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 PCGF3Q3KNV8 242 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 PHYHD1Q5SRE7 291 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 ZNF813Q6ZN06 617 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 ZNF836Q6ZNA1 936 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 PEX5LQ8IYB4 626 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 SYT14Q8NB59 555 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 VPS37AQ8NEZ2 397 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 MGARPQ8TDB4 240 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 TESCQ96BS2 214 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 SLC25A36Q96CQ1 311 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 DUX5Q96PT3 197 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 DENND2DQ9H6A0 471 aaPredicted RBP17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 ZNF224Q9NZL3 707 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 ZDHHC2Q9UIJ5 367 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 ZNF281Q9Y2X9 895 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 WIPI2Q9Y4P8 454 aa17.26■□□□□ 0.35
PDLIM1-202ENST00000477757 M0R3G1 203 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 NUDT17P0C025 328 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 CRYBB2P43320 205 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 PTDSS1P48651 473 aaKnown RBP17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 ANXA11P50995 505 aaKnown RBP17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 CCL8P80075 99 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 PIGFQ07326 219 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 C1DQ13901 141 aaKnown RBP17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 CHI3L2Q15782 390 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 SMU1Q2TAY7 513 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 ALKBH6Q3KRA9 238 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 LIN52Q52LA3 116 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 MECRQ9BV79 373 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 HINT3Q9NQE9 182 aaKnown RBP17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 MKS1Q9NXB0 559 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 NKIRAS2Q9NYR9 191 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 FBXL3Q9UKT7 428 aa17.25■□□□□ 0.35
PDLIM1-202ENST00000477757 IGHV1-69-2A0A0G2JMI3 117 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 CLDN25C9JDP6 229 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 RAB36O95755 333 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 RNASE1P07998 156 aaKnown RBP17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 NR2F1P10589 423 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 PRG2P13727 222 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 SERPINB5P36952 375 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 RPS5P46782 204 aaKnown RBP17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 GIPRP48546 466 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 TEKQ02763 1124 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 EGR4Q05215 589 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 RNF220Q5VTB9 566 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 ATG16L1Q676U5 607 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 TMEM154Q6P9G4 183 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 VRK2Q86Y07 508 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 C20orf196Q8IYI0 205 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 CCDC115Q96NT0 180 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 GPR160Q9UJ42 338 aa17.24■□□□□ 0.35
PDLIM1-202ENST00000477757 LOC102725191A0A1B0GVB3 256 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 M0R082 166 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 AIM2O14862 343 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 FAM153BP0C7A2 387 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 B4GALT1P15291 398 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 NCF2P19878 526 aaPredicted RBP17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 LSP1P33241 339 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 RAD52P43351 418 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 DPY19L1Q2PZI1 675 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 SPANXN4Q5MJ08 99 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 RETREG3Q86VR2 466 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 OR52P1PQ8NH57 321 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 ZNF417Q8TAU3 575 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 SNX33Q8WV41 574 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 KTI12Q96EK9 354 aaPredicted RBP17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 ZNF587Q96SQ5 575 aaPredicted RBP17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 TAAR3PQ9P1P4 343 aa17.23■□□□□ 0.35
PDLIM1-202ENST00000477757 IGLV3-9A0A075B6K5 115 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 SHBGP04278 402 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 KLF3P57682 345 aaPredicted RBP17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 RAB1AP62820 205 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 LCN2P80188 198 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 MFSD13AQ14CX5 517 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 MAPK11Q15759 364 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 RGS7BPQ6MZT1 257 aaPredicted RBP17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 TREML1Q86YW5 311 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 POP5Q969H6 163 aaKnown RBP17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 TIMD4Q96H15 378 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 APOPT1Q96IL0 206 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 LRR1Q96L50 414 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 ZIM3Q96PE6 472 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 GPA33Q99795 319 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 PPCSQ9HAB8 311 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 ZNF69Q9UC07 566 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 NUP50Q9UKX7 468 aa17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 ZNF443Q9Y2A4 671 aaPredicted RBP17.22■□□□□ 0.35
PDLIM1-202ENST00000477757 PPIAL4EA0A075B759 164 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 PPIAL4CA0A0B4J2A2 164 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 SLC22A23A1A5C7 686 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 SMIM23A6NLE4 172 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 PPIAL4DF5H284 164 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 CLDN34H7C241 214 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 UBL3O95164 117 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 CLPTM1O96005 669 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 PPIAL4FP0DN26 164 aa17.21■□□□□ 0.35
PDLIM1-202ENST00000477757 GCH1P30793 250 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms