RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 NOX1Q9Y5S8 564 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 CDH10Q9Y6N8 788 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 MS4A18H0YCH9 400 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 AKAP8O43823 692 aaKnown RBP13.61□□□□□ -0.23
SEC13-215ENST00000477547 TNFSF13O75888 250 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 NDUFB2O95178 105 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 SOX14O95416 240 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 F13BP05160 661 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 YES1P07947 543 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 TSPAN19P0C672 248 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 HLA-DOBP13765 273 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 ANXA8P13928 327 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 CTSSP25774 331 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 PRPS1P60891 318 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 ZP4Q12836 540 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 TOP3AQ13472 1001 aaPredicted RBP13.61□□□□□ -0.23
SEC13-215ENST00000477547 FHL1Q13642 323 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 MS4A18Q3C1V0 323 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 FAHD1Q6P587 224 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 PXKQ7Z7A4 578 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 GALNT5Q7Z7M9 940 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 OR6K3Q8NGY3 331 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 DNAJC9Q8WXX5 260 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 ZNF775Q96BV0 537 aaPredicted RBP13.61□□□□□ -0.23
SEC13-215ENST00000477547 ZNF385AQ96PM9 386 aaKnown RBP13.61□□□□□ -0.23
SEC13-215ENST00000477547 TNFRSF13CQ96RJ3 184 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 CIB1Q99828 191 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 OR52D1Q9H346 318 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 C12orf49Q9H741 205 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 FANCFQ9NPI8 374 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 TBC1D23Q9NUY8 699 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 COQ3Q9NZJ6 369 aa13.61□□□□□ -0.23
SEC13-215ENST00000477547 NOSIPQ9Y314 301 aaKnown RBP13.61□□□□□ -0.23
SEC13-215ENST00000477547 LOC102725191A0A1B0GVB3 256 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 A0A1W2PRG6 482 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 MCIDASD6RGH6 385 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 PDLIM1O00151 329 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 DVL2O14641 736 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 ZG16O60844 167 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 ZNF26P17031 533 aaPredicted RBP13.6□□□□□ -0.23
SEC13-215ENST00000477547 BMP5P22003 454 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 CHRNB4P30926 498 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 RPL4P36578 427 aaKnown RBP13.6□□□□□ -0.23
SEC13-215ENST00000477547 KIR2DL2P43627 348 aaPredicted RBP13.6□□□□□ -0.23
SEC13-215ENST00000477547 SMSP52788 366 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 CLDN17P56750 224 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 FXYD6P3P58550 94 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 MELKQ14680 651 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 ANKRD34AQ69YU3 496 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 RPL13AP3Q6NVV1 102 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 SMARCD3Q6STE5 483 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 KLHL17Q6TDP4 642 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 THSD4Q6ZMP0 1018 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 RASSF6Q6ZTQ3 369 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 CREB3L2Q70SY1 520 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 SLC35D2Q76EJ3 337 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.6□□□□□ -0.23
SEC13-215ENST00000477547 NUFIP2Q7Z417 695 aaKnown RBP13.6□□□□□ -0.23
SEC13-215ENST00000477547 OR52L1Q8NGH7 329 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 TMEM45BQ96B21 275 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 POLDIP3Q9BY77 421 aaKnown RBP13.6□□□□□ -0.23
SEC13-215ENST00000477547 UCK2Q9BZX2 261 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 EGLN3Q9H6Z9 239 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 DCLRE1BQ9H816 532 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 MED29Q9NX70 200 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 IL20RAQ9UHF4 553 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 RCE1Q9Y256 329 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 POFUT2Q9Y2G5 429 aa13.6□□□□□ -0.23
SEC13-215ENST00000477547 HCFC1P51610 2035 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 WIPF3A6NGB9 483 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 EEF1E1-BLOC1S5C9J1V9 151 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 EI24O14681 340 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 EEF1E1O43324 174 aaKnown RBP13.59□□□□□ -0.23
SEC13-215ENST00000477547 SMNDC1O75940 238 aaKnown RBP eCLIP13.59□□□□□ -0.23
SEC13-215ENST00000477547 IL18BPO95998 194 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 IFNGR1P15260 489 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 IGFBP5P24593 272 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 SLC6A6P31641 620 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 OPRM1P35372 400 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 DAP3P51398 398 aaKnown RBP13.59□□□□□ -0.23
SEC13-215ENST00000477547 TRIP10Q15642 601 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 NIPAL3Q6P499 406 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 AAED1Q7RTV5 226 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 KIF18BQ86Y91 864 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 CLDN22Q8N7P3 220 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 LRRC75AQ8NAA5 344 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 RELL2Q8NC24 303 aaPredicted RBP13.59□□□□□ -0.23
SEC13-215ENST00000477547 ASB5Q8WWX0 329 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 APH1AQ96BI3 265 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 GPX7Q96SL4 187 aaPredicted RBP13.59□□□□□ -0.23
SEC13-215ENST00000477547 C9orf16Q9BUW7 83 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 KATNB1Q9BVA0 655 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 SMURF2Q9HAU4 748 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 PAPOLBQ9NRJ5 636 aaKnown RBP13.59□□□□□ -0.23
SEC13-215ENST00000477547 KRT84Q9NSB2 600 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 STX18Q9P2W9 335 aaKnown RBP13.59□□□□□ -0.23
SEC13-215ENST00000477547 PROCRQ9UNN8 238 aa13.59□□□□□ -0.23
SEC13-215ENST00000477547 OTOGQ6ZRI0 2925 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 POLQO75417 2590 aa13.58□□□□□ -0.24
SEC13-215ENST00000477547 NPIPB13A6NJU9 1138 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms