RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 IL17RDQ8NFM7 739 aa13.69□□□□□ -0.22
CLDN11-204ENST00000477531 OR10H5Q8NGA6 315 aa13.69□□□□□ -0.22
CLDN11-204ENST00000477531 OR10A6Q8NH74 314 aa13.69□□□□□ -0.22
CLDN11-204ENST00000477531 FAM168AQ92567 244 aa13.69□□□□□ -0.22
CLDN11-204ENST00000477531 SLC41A3Q96GZ6 507 aa13.69□□□□□ -0.22
CLDN11-204ENST00000477531 LRR1Q96L50 414 aa13.69□□□□□ -0.22
CLDN11-204ENST00000477531 CA10Q9NS85 328 aa13.69□□□□□ -0.22
CLDN11-204ENST00000477531 FBXO9Q9UK97 447 aaPredicted RBP13.69□□□□□ -0.22
CLDN11-204ENST00000477531 USP22Q9UPT9 525 aa13.69□□□□□ -0.22
CLDN11-204ENST00000477531 POFUT2Q9Y2G5 429 aa13.69□□□□□ -0.22
CLDN11-204ENST00000477531 SLC35F4A4IF30 521 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 CPSF4LA6NMK7 179 aaKnown RBP13.68□□□□□ -0.22
CLDN11-204ENST00000477531 B9A039 149 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 CD5LO43866 347 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 TPST2O60704 377 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 CRLF1O75462 422 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 IGLV1-44P01699 117 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 CECR9P0C854 216 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 ARR3P36575 388 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 IDH3GP51553 393 aaPredicted RBP13.68□□□□□ -0.22
CLDN11-204ENST00000477531 TRMT5Q32P41 509 aaKnown RBP13.68□□□□□ -0.22
CLDN11-204ENST00000477531 ENTPD8Q5MY95 495 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 TTC33Q6PID6 262 aaPredicted RBP13.68□□□□□ -0.22
CLDN11-204ENST00000477531 VHLLQ6RSH7 139 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 SLC46A3Q7Z3Q1 461 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 PXKQ7Z7A4 578 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 C20orf196Q8IYI0 205 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 TMEM123Q8N131 208 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 ZNF525Q8N782 197 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 OR6T1Q8NGN1 323 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 OR6N1Q8NGY5 312 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 OR5J2Q8NH18 312 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 VANGL1Q8TAA9 524 aaPredicted RBP13.68□□□□□ -0.22
CLDN11-204ENST00000477531 HTRA1Q92743 480 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 ECSITQ9BQ95 431 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 WFDC6Q9BQY6 131 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 EMC6Q9BV81 110 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 TMEM120AQ9BXJ8 343 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 YAE1D1Q9NRH1 226 aa13.68□□□□□ -0.22
CLDN11-204ENST00000477531 PLPP3O14495 311 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 SERPINI2O75830 405 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 PDE5AO76074 875 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 HPRP00739 348 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 F12P00748 615 aaPredicted RBP13.67□□□□□ -0.22
CLDN11-204ENST00000477531 IGKV3-15P01624 115 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 HIST1H2ABP04908 130 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 ADORA3P0DMS8 318 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 HLA-DOBP13765 273 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 CD247P20963 164 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 ARFIP2P53365 341 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 KRTAP1-1Q07627 177 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 NPRL3Q12980 569 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 MAPRE2Q15555 327 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 SWI5Q1ZZU3 235 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 HIST3H2AQ7L7L0 130 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 ADAMTS16Q8TE57 1224 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 NANOS1Q8WY41 292 aaKnown RBP13.67□□□□□ -0.22
CLDN11-204ENST00000477531 PROX1Q92786 737 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 HIST1H2ACQ93077 130 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 MPP4Q96JB8 637 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 MOGAT1Q96PD6 335 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 VRK1Q99986 396 aaPredicted RBP13.67□□□□□ -0.22
CLDN11-204ENST00000477531 ULBP2Q9BZM5 246 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 NELFAQ9H3P2 528 aa13.67□□□□□ -0.22
CLDN11-204ENST00000477531 SONP18583 2426 aaKnown RBP13.66□□□□□ -0.22
CLDN11-204ENST00000477531 TRAPPC13A5PLN9 417 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 LRRN3E7EW58 273 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 C11orf98E9PRG8 122 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 NPPAP01160 153 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 OR4A8P0C604 315 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 CD79AP11912 226 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 PDLIM4P50479 330 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 LOXL1Q08397 574 aaPredicted RBP13.66□□□□□ -0.22
CLDN11-204ENST00000477531 CAMK2DQ13557 499 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 VMACQ2NL98 169 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 NANOGP8Q6NSW7 305 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 LINC00114Q6XXX2 140 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 ZNF813Q6ZN06 617 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 PRIMA1Q86XR5 153 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 NUP37Q8NFH4 326 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 GPR32P1Q8NGA4 272 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 ZNF837Q96EG3 531 aaPredicted RBP13.66□□□□□ -0.22
CLDN11-204ENST00000477531 TXNDC15Q96J42 360 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 TNFRSF13CQ96RJ3 184 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 NANOGQ9H9S0 305 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 NANSQ9NR45 359 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 MED29Q9NX70 200 aa13.66□□□□□ -0.22
CLDN11-204ENST00000477531 ANK3Q12955 4377 aaKnown RBP13.65□□□□□ -0.22
CLDN11-204ENST00000477531 BBIP1A8MTZ0 92 aa13.65□□□□□ -0.22
CLDN11-204ENST00000477531 A8MV72 311 aaPredicted RBP13.65□□□□□ -0.22
CLDN11-204ENST00000477531 DYNC1I1O14576 645 aa13.65□□□□□ -0.22
CLDN11-204ENST00000477531 RNF13O43567 381 aa13.65□□□□□ -0.22
CLDN11-204ENST00000477531 ENTPD5O75356 428 aa13.65□□□□□ -0.22
CLDN11-204ENST00000477531 CH25HO95992 272 aa13.65□□□□□ -0.22
CLDN11-204ENST00000477531 IFNA14P01570 189 aa13.65□□□□□ -0.22
CLDN11-204ENST00000477531 ERCC1P07992 297 aaPredicted RBP13.65□□□□□ -0.22
CLDN11-204ENST00000477531 CALCRP30988 508 aa13.65□□□□□ -0.22
CLDN11-204ENST00000477531 CSNK1A1P48729 337 aa13.65□□□□□ -0.22
CLDN11-204ENST00000477531 NPTX1Q15818 432 aa13.65□□□□□ -0.22
CLDN11-204ENST00000477531 CARTPTQ16568 116 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms