RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PSMG2Q969U7 264 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ISOC2Q96AB3 205 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 CPB2Q96IY4 423 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 B3GALT6Q96L58 329 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ZNF641Q96N77 438 aaPredicted RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 TOX2Q96NM4 488 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ATP5SQ99766 215 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 APOL2Q9BQE5 337 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 RPP25Q9BUL9 199 aaKnown RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 ZNF426Q9BUY5 554 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ZYG11BQ9C0D3 744 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 TOLLIPQ9H0E2 274 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 DEFB129Q9H1M3 183 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 MEGF9Q9H1U4 602 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 NXF3Q9H4D5 531 aaKnown RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 THSD1Q9NS62 852 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 DCAF13Q9NV06 445 aaKnown RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 NECAP2Q9NVZ3 263 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 TMEM45AQ9NWC5 275 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ING1Q9UK53 422 aaPredicted RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 ELF5Q9UKW6 265 aaPredicted RBP2.53□□□□□ -2
HMGN4-202ENST00000477243 SLC7A7Q9UM01 511 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 AUP1Q9Y679 476 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 V9GYY9 64 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 WNK3Q9BYP7 1800 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 ASXL3Q9C0F0 2248 aa2.53□□□□□ -2
HMGN4-202ENST00000477243 FER1L6Q2WGJ9 1857 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ROCK1Q13464 1354 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 RAB3GAP2Q9H2M9 1393 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 RGPD5Q99666 1765 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 UBN2Q6ZU65 1347 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ADGRA3Q8IWK6 1321 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 PCDH11XQ9BZA7 1347 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TRIOO75962 3097 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TRBV5-3A0A0A0MS03 114 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 C5orf60A6NFR6 353 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 MYMKA6NI61 221 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 SAGE2PA6NJ88 616 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 G3V4G9 280 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 SMLR1H3BR10 107 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 CLDN34H7C241 214 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 CCL24O00175 119 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 PRMT5O14744 637 aaPredicted RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TIMM23O14925 209 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TFECO14948 347 aaPredicted RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 MLNRO43193 412 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ZNHIT1O43257 154 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 HYAL3O43820 417 aaPredicted RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ANXA9O76027 345 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 DEXIO95424 95 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 IFNA2P01563 188 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ATP1B1P05026 303 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 KRT16P08779 473 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 CTXN2P0C2S0 81 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 RNH1P13489 461 aaKnown RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ABOP16442 354 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF26P17031 533 aaPredicted RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 PSMC3P17980 439 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 CA6P23280 308 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ATP5A1P25705 553 aaKnown RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 DCKP27707 260 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 EPHA2P29317 976 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 PRKAR2BP31323 418 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 PSMD7P51665 324 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 AP3S2P59780 193 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 GPX6P59796 221 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ATP6V0D1P61421 351 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ARF6P62330 175 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TUBA4AP68366 448 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 SELENBP1Q13228 472 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 FOXE3Q13461 319 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 CTTNQ14247 550 aaKnown RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 CAPRIN1Q14444 709 aaKnown RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 RBM39Q14498 530 aaKnown RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF234Q14588 700 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 UBE2V2Q15819 145 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 KYAT1Q16773 422 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 IMPG1Q17R60 797 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 NDUFAF6Q330K2 333 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 SLC36A2Q495M3 483 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 C2CD6Q53TS8 623 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 DMRTC1Q5HYR2 192 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 NKAPLQ5M9Q1 402 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TCHHL1Q5QJ38 904 aaPredicted RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TYW3Q6IPR3 259 aaKnown RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ACSM5Q6NUN0 579 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 FAHD2BQ6P2I3 314 aaPredicted RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 GDPD4Q6W3E5 623 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 CCNI2Q6ZMN8 369 aaPredicted RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 TTLL10Q6ZVT0 673 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ABHD13Q7L211 337 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 FCRLAQ7L513 359 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 NIPA1Q7RTP0 329 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 HSD11B1LQ7Z5J1 315 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 C5orf24Q7Z6I8 188 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 SETD3Q86TU7 594 aaPredicted RBP2.52□□□□□ -2.01
HMGN4-202ENST00000477243 HPS6Q86YV9 775 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 ZBED8Q8IZ13 594 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 IQCKQ8N0W5 287 aa2.52□□□□□ -2.01
HMGN4-202ENST00000477243 SLC39A11Q8N1S5 342 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms