RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ALKBH6Q3KRA9 238 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 MMEL1Q495T6 779 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 GLIPR1L2Q4G1C9 344 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 RBMS3Q6XE24 437 aaKnown RBP9.69□□□□□ -0.86
BRCA1-213ENST00000476777 DOK3Q7L591 496 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 TMEM123Q8N131 208 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 C4orf33Q8N1A6 199 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 PIK3C3Q8NEB9 887 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 STK35Q8TDR2 534 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 SLC25A36Q96CQ1 311 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 MECRQ9BV79 373 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 DPY30Q9C005 99 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 SLITRK2Q9H156 845 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 MED29Q9NX70 200 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF224Q9NZL3 707 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 NOP53Q9NZM5 478 aaKnown RBP9.69□□□□□ -0.86
BRCA1-213ENST00000476777 DSPPQ9NZW4 1301 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 ZDHHC2Q9UIJ5 367 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 C17orf100A8MU93 164 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 TRAF3IP2O43734 574 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-213ENST00000476777 FZD7O75084 574 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 FAM153BP0C7A2 387 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 PRG2P13727 222 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 CRYBB2P43320 205 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 RAD52P43351 418 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 RPS5P46782 204 aaKnown RBP9.68□□□□□ -0.86
BRCA1-213ENST00000476777 GIPRP48546 466 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 PTDSS1P48651 473 aaKnown RBP9.68□□□□□ -0.86
BRCA1-213ENST00000476777 AQP5P55064 265 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 GALK2Q01415 458 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 C1DQ13901 141 aaKnown RBP9.68□□□□□ -0.86
BRCA1-213ENST00000476777 MAPK11Q15759 364 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 CHI3L2Q15782 390 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 ANXA8L1Q5VT79 327 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF836Q6ZNA1 936 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF627Q7L945 461 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 VRK2Q86Y07 508 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 PEX5LQ8IYB4 626 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 C20orf196Q8IYI0 205 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 SYT14Q8NB59 555 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 VPS37AQ8NEZ2 397 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 TAF15Q92804 592 aaKnown RBP eCLIP9.68□□□□□ -0.866e-6■□□□□ 11.2
BRCA1-213ENST00000476777 KTI12Q96EK9 354 aaPredicted RBP9.68□□□□□ -0.86
BRCA1-213ENST00000476777 ZMAT3Q9HA38 289 aaKnown RBP9.68□□□□□ -0.86
BRCA1-213ENST00000476777 HINT3Q9NQE9 182 aaKnown RBP9.68□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF281Q9Y2X9 895 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 WIPI2Q9Y4P8 454 aa9.68□□□□□ -0.86
BRCA1-213ENST00000476777 NOTCH3Q9UM47 2321 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 LOC102725191A0A1B0GVB3 256 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 CLPTM1O96005 669 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 SHBGP04278 402 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 NR2F1P10589 423 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 B4GALT1P15291 398 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 RAB1AP62820 205 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 NKPD1Q17RQ9 610 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 SMU1Q2TAY7 513 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 PCGF3Q3KNV8 242 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 CARD17Q5XLA6 110 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 ATG16L1Q676U5 607 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 TMEM154Q6P9G4 183 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF813Q6ZN06 617 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF584Q8IVC4 421 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 CLIP4Q8N3C7 705 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 OR52P1PQ8NH57 321 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 MGARPQ8TDB4 240 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 TESCQ96BS2 214 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 TSPAN32Q96QS1 320 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 DENND2DQ9H6A0 471 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-213ENST00000476777 NKIRAS2Q9NYR9 191 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 TAAR3PQ9P1P4 343 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF69Q9UC07 566 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 SLC7A8Q9UHI5 535 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 CHST2Q9Y4C5 530 aa9.67□□□□□ -0.86
BRCA1-213ENST00000476777 IGLV3-9A0A075B6K5 115 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 IGHV1-69-2A0A0G2JMI3 117 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 M0R082 166 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 AIM2O14862 343 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 AKAP8O43823 692 aaKnown RBP9.66□□□□□ -0.86
BRCA1-213ENST00000476777 RAB36O95755 333 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 RNASE1P07998 156 aaKnown RBP9.66□□□□□ -0.86
BRCA1-213ENST00000476777 NCF2P19878 526 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-213ENST00000476777 GTF2E2P29084 291 aaKnown RBP9.66□□□□□ -0.86
BRCA1-213ENST00000476777 LCN2P80188 198 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 TXNL4AP83876 142 aaKnown RBP9.66□□□□□ -0.86
BRCA1-213ENST00000476777 TEKQ02763 1124 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 BAMBIQ13145 260 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 RAB39AQ14964 217 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 MFSD13AQ14CX5 517 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 LIN52Q52LA3 116 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 SPANXN4Q5MJ08 99 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 COX20Q5RI15 118 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 HIST2H2BDQ6DRA6 164 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 RGS7BPQ6MZT1 257 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-213ENST00000476777 USP51Q70EK9 711 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 SERPINA11Q86U17 422 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 RETREG3Q86VR2 466 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 TREML1Q86YW5 311 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 WDFY1Q8IWB7 410 aa9.66□□□□□ -0.86
BRCA1-213ENST00000476777 BCL6BQ8N143 479 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-213ENST00000476777 DEFB108BQ8NET1 73 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms