RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 LGALS13Q9UHV8 139 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 GRIP1Q9Y3R0 1128 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 TANC2Q9HCD6 1990 aa10.24□□□□□ -0.77
HDAC6-219ENST00000476625 A0A1W2PPW3 197 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF99A8MXY4 864 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-219ENST00000476625 TRIM77I1YAP6 450 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 PLPP2O43688 288 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 DEAF1O75398 565 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-219ENST00000476625 VAMP5O95183 116 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 MPZL1O95297 269 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 NUDT17P0C025 328 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 LBPP18428 481 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 BGNP21810 368 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 GTF2E2P29084 291 aaKnown RBP10.23□□□□□ -0.77
HDAC6-219ENST00000476625 SERPINB5P36952 375 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 CRATP43155 626 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 COPZ1P61923 177 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 CCL8P80075 99 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 CAMK2DQ13557 499 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 C1DQ13901 141 aaKnown RBP10.23□□□□□ -0.77
HDAC6-219ENST00000476625 GNA13Q14344 377 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 MFSD13AQ14CX5 517 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 GSG1Q2KHT4 349 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 SMU1Q2TAY7 513 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 GLIPR1L2Q4G1C9 344 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF311Q5JNZ3 666 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 TMEM255AQ5JRV8 349 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 C1QTNF12Q5T7M4 302 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 RNF220Q5VTB9 566 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 C20orf196Q8IYI0 205 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF440Q8IYI8 595 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 RIBC1Q8N443 379 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-219ENST00000476625 VPS37AQ8NEZ2 397 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 RNF217Q8TC41 542 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 MAL2Q969L2 176 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 WFDC6Q9BQY6 131 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 WDR55Q9H6Y2 383 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF665Q9H7R5 613 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 AIG1Q9NVV5 245 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 P2RX2Q9UBL9 471 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 FBXO9Q9UK97 447 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-219ENST00000476625 RCE1Q9Y256 329 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 CMYA5Q8N3K9 4069 aa10.23□□□□□ -0.77
HDAC6-219ENST00000476625 SDHDO14521 159 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 TFP02787 698 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 ARAFP10398 606 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 HOXB1P14653 301 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-219ENST00000476625 SLC1A6P48664 564 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 MAP2K6P52564 334 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 CLNS1AP54105 237 aaKnown RBP10.22□□□□□ -0.77
HDAC6-219ENST00000476625 DSTNP60981 165 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 DEFA6Q01524 100 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 POU3F1Q03052 451 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-219ENST00000476625 GKAP1Q5VSY0 366 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-219ENST00000476625 SKA3Q8IX90 412 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 CNPY4Q8N129 248 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 C10orf111Q8N326 155 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 STK35Q8TDR2 534 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 ZMYND19Q96E35 227 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-219ENST00000476625 MOGAT1Q96PD6 335 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 ZNF317Q96PQ6 595 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-219ENST00000476625 SPATA9Q9BWV2 254 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 PPCSQ9HAB8 311 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 TAAR3PQ9P1P4 343 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 KLHL14Q9P2G3 628 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 OPN4Q9UHM6 478 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 RAP2CQ9Y3L5 183 aa10.22□□□□□ -0.77
HDAC6-219ENST00000476625 SOX21Q9Y651 276 aaPredicted RBP10.22□□□□□ -0.77
HDAC6-219ENST00000476625 A0A1B0GWA3 101 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 AIM2O14862 343 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 TPST1O60507 370 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 SERPINE1P05121 402 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 PCMT1P22061 227 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 GLRXP35754 106 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 RPL14P50914 215 aaKnown RBP10.21□□□□□ -0.77
HDAC6-219ENST00000476625 RAB1AP62820 205 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 UBA52P62987 128 aaKnown RBP10.21□□□□□ -0.77
HDAC6-219ENST00000476625 MYBPC1Q00872 1141 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 MPP2Q14168 576 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 TSTQ16762 297 aaKnown RBP10.21□□□□□ -0.77
HDAC6-219ENST00000476625 TRMT5Q32P41 509 aaKnown RBP10.21□□□□□ -0.77
HDAC6-219ENST00000476625 SLC9B1Q4ZJI4 515 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 PDLIM3Q53GG5 364 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-219ENST00000476625 SPRNQ5BIV9 151 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 PRR31Q5SQ13 230 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 NHLRC1Q6VVB1 395 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 WDR88Q6ZMY6 472 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 C1QL2Q7Z5L3 287 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 UEVLDQ8IX04 471 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 MIER2Q8N344 545 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 PIK3C3Q8NEB9 887 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 OR9I1Q8NGQ6 314 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 C1orf147Q96MC9 270 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-219ENST00000476625 RBM4Q9BWF3 364 aaKnown RBP10.21□□□□□ -0.77
HDAC6-219ENST00000476625 MEAF6Q9HAF1 191 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 CORINQ9Y5Q5 1042 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 NOX1Q9Y5S8 564 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 GPR45Q9Y5Y3 372 aa10.21□□□□□ -0.77
HDAC6-219ENST00000476625 TRAV20A0A0B4J274 112 aa10.2□□□□□ -0.78
HDAC6-219ENST00000476625 VSTM5A8MXK1 200 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms