RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 PXKQ7Z7A4 578 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 C20orf196Q8IYI0 205 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 GPR137CQ8N3F9 429 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 TPD52L3Q96J77 140 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 RADILQ96JH8 1075 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 SLC19A3Q9BZV2 496 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 FKRPQ9H9S5 495 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 TAS2R5Q9NYW4 299 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 RIMS3Q9UJD0 308 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 NOX1Q9Y5S8 564 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 SLC35F4A4IF30 521 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 GMNCA6NCL1 334 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 C11orf98E9PRG8 122 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 AKAP8O43823 692 aaKnown RBP18.48■□□□□ 0.55
LIME1-204ENST00000476183 SERPINI2O75830 405 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 OR5F1O95221 314 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 WNT11O96014 354 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 ADORA3P0DMS8 318 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 GSK3BP49841 420 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 UGT2B15P54855 530 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 SELENOWP63302 87 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 TUBA1BP68363 451 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 TUBA4AP68366 448 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 CEACAM16Q2WEN9 425 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 C1QTNF12Q5T7M4 302 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 ANKRD16Q6P6B7 361 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 SLC22A25Q6T423 547 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 KLHL24Q6TFL4 600 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 TUBA1AQ71U36 451 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 SLC46A3Q7Z3Q1 461 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 VTCN1Q7Z7D3 282 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 CPLX4Q7Z7G2 160 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 PIK3C3Q8NEB9 887 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 ANKK1Q8NFD2 765 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 PFN4Q8NHR9 129 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 MAGEE2Q8TD90 523 aaPredicted RBP18.48■□□□□ 0.55
LIME1-204ENST00000476183 TMEM255BQ8WV15 326 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 Q96MF0 132 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 POLR2J2Q9GZM3 115 aaKnown RBP18.48■□□□□ 0.55
LIME1-204ENST00000476183 NSRP1Q9H0G5 558 aaKnown RBP18.48■□□□□ 0.55
LIME1-204ENST00000476183 POLR2J3Q9H1A7 115 aaKnown RBP18.48■□□□□ 0.55
LIME1-204ENST00000476183 CRLF2Q9HC73 371 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 OBP2BQ9NPH6 170 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 NANSQ9NR45 359 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 ZANQ9Y493 2812 aa18.48■□□□□ 0.55
LIME1-204ENST00000476183 ARPC4-TTLL3A0A0A6YYG9 625 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 M0R3G1 203 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 CXCR6O00574 342 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 ASAH2BP0C7U1 165 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 FUT4P22083 530 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 CDKN1AP38936 164 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 SH3BGRP55822 239 aaPredicted RBP18.47■□□□□ 0.55
LIME1-204ENST00000476183 ATP5J2P56134 94 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 GNGT1P63211 74 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 CAMK2DQ13557 499 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 DTX2Q86UW9 622 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 CMTM5Q96DZ9 223 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 TRAF4Q9BUZ4 470 aaPredicted RBP18.47■□□□□ 0.55
LIME1-204ENST00000476183 GSX1Q9H4S2 264 aaPredicted RBP18.47■□□□□ 0.55
LIME1-204ENST00000476183 ALG2Q9H553 416 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 ZNF229Q9UJW7 825 aa18.47■□□□□ 0.55
LIME1-204ENST00000476183 IGHV1-18A0A0C4DH31 117 aa18.46■□□□□ 0.55
LIME1-204ENST00000476183 IFNGR1P15260 489 aa18.46■□□□□ 0.55
LIME1-204ENST00000476183 FOSL1P15407 271 aa18.46■□□□□ 0.55
LIME1-204ENST00000476183 PSME3P61289 254 aa18.46■□□□□ 0.55
LIME1-204ENST00000476183 ZP4Q12836 540 aa18.46■□□□□ 0.55
LIME1-204ENST00000476183 LRR1Q96L50 414 aa18.46■□□□□ 0.55
LIME1-204ENST00000476183 C20orf141Q9NUB4 165 aa18.46■□□□□ 0.55
LIME1-204ENST00000476183 ABCD2Q9UBJ2 740 aa18.46■□□□□ 0.55
LIME1-204ENST00000476183 POU2F3Q9UKI9 436 aa18.46■□□□□ 0.55
LIME1-204ENST00000476183 A4GNTQ9UNA3 340 aa18.46■□□□□ 0.55
LIME1-204ENST00000476183 SNX13Q9Y5W8 968 aa18.46■□□□□ 0.55
LIME1-204ENST00000476183 NIPBLQ6KC79 2804 aaeCLIP18.45■□□□□ 0.54
LIME1-204ENST00000476183 ZNF503-AS2A6NEH8 195 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 TRIM64A6NGJ6 449 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 TRIM64BA6NI03 449 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 ATP6V1G2-DDX39BF2Z307 99 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 SEC14L2O76054 403 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 OR6A2O95222 327 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 MT-ND1P03886 318 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 PRDX6P30041 224 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 RBM34P42696 430 aaKnown RBP18.45■□□□□ 0.54
LIME1-204ENST00000476183 BIDP55957 195 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 UBE2NP61088 152 aaKnown RBP18.45■□□□□ 0.54
LIME1-204ENST00000476183 CIARTQ8N365 385 aaPredicted RBP18.45■□□□□ 0.54
LIME1-204ENST00000476183 TMEM239Q8WW34 195 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 SLC38A2Q96QD8 506 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 DHRS9Q9BPW9 319 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 CRNNQ9UBG3 495 aaPredicted RBP18.45■□□□□ 0.54
LIME1-204ENST00000476183 TLN2Q9Y4G6 2542 aa18.45■□□□□ 0.54
LIME1-204ENST00000476183 ZNF726A6NNF4 738 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 ZNF99A8MXY4 864 aaPredicted RBP18.44■□□□□ 0.54
LIME1-204ENST00000476183 GSTA4O15217 222 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 RNF13O43567 381 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 UMPSP11172 480 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 HOXB1P14653 301 aaPredicted RBP18.44■□□□□ 0.54
LIME1-204ENST00000476183 TTKP33981 857 aa18.44■□□□□ 0.54
LIME1-204ENST00000476183 YAP1P46937 504 aaKnown RBP18.44■□□□□ 0.54
LIME1-204ENST00000476183 LSM11P83369 360 aaKnown RBP eCLIP18.44■□□□□ 0.54
LIME1-204ENST00000476183 CBLL1Q75N03 491 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms