RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 MAT2BQ9NZL9 334 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ZNF624Q9P2J8 865 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 SLC13A4Q9UKG4 626 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 MED31Q9Y3C7 131 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ENTPD2Q9Y5L3 495 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 A0A1B0GWA3 101 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 A0A1W2PQ72 361 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 A0A1W2PQU0 124 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 HSPB2A8KAH6 182 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 A8MXK9 166 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 MCRIP1C9JLW8 97 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 BTN3A3O00478 584 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 SLC31A1O15431 190 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 GMDSO60547 372 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 CTNSO60931 367 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 DNAJB6O75190 326 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 UPK3AO75631 287 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 NDUFB6O95139 128 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 GPR75O95800 540 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 CBX7O95931 251 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 CFDP00746 253 aaPredicted RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 IFNA7P01567 189 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 PCCBP05166 539 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 HOXD4P09016 255 aaPredicted RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 CD3GP09693 182 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 UBL4AP11441 157 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 NAGAP17050 411 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 FUT1P19526 365 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 PSMB1P20618 241 aaKnown RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 GIFP27352 417 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 MAPK3P27361 379 aaPredicted RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 SLC6A6P31641 620 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 PTGER1P34995 402 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 IGFALSP35858 605 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 GDNFP39905 211 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 CD96P40200 585 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 GDI2P50395 445 aaKnown RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 RAB8AP61006 207 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 RPS21P63220 83 aaKnown RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 SNTA1Q13424 505 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 SNTB2Q13425 540 aaKnown RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 EXOSC2Q13868 293 aaKnown RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 MPPED2Q15777 294 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 HSPB2Q16082 182 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 TRMT12Q53H54 448 aaKnown RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 TMEM255AQ5JRV8 349 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 METTL11BQ5VVY1 283 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 SLC6A19Q695T7 634 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 FAM166AQ6J272 317 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 FDX2Q6P4F2 183 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 ARL9Q6T311 187 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 IL20RBQ6UXL0 311 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 DPY19L2P2Q6ZN68 376 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 Q6ZTK2 550 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 RNF44Q7L0R7 432 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 LINGO2Q7L985 606 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 KCTD20Q7Z5Y7 419 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 ZNF595Q8IYB9 648 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 TOMM5Q8N4H5 51 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 ZSCAN1Q8NBB4 408 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 KCT2Q8NC54 265 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 OR13C2Q8NGS9 318 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 LHFPL5Q8TAF8 219 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 C15orf40Q8WUR7 153 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 ZNRF4Q8WWF5 429 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 SLC22A18Q96BI1 424 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 ANKRD9Q96BM1 317 aaPredicted RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 HAVCR1Q96D42 359 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 ZNF578Q96N58 590 aaPredicted RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 TNFRSF13CQ96RJ3 184 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 MACROD1Q9BQ69 325 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 APOOQ9BUR5 198 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 DUSP23Q9BVJ7 150 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 TRIM2Q9C040 744 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 SHARPINQ9H0F6 387 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 HDHD2Q9H0R4 259 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 C1orf198Q9H425 327 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 CDCP1Q9H5V8 836 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 NARFLQ9H6Q4 476 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 FBXO34Q9NWN3 711 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 AKAP7Q9P0M2 348 aaPredicted RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 MGAT4CQ9UBM8 478 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 DKK4Q9UBT3 224 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 FBXL4Q9UKA2 621 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 FOXJ3Q9UPW0 622 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 CLDN16Q9Y5I7 305 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 ETV7Q9Y603 341 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 THADAQ6YHU6 1953 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 ACACBO00763 2458 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 SPAG17Q6Q759 2223 aa6.25□□□□□ -1.41
UBR4-212ENST00000475973 TNRC6BQ9UPQ9 1833 aaKnown RBP6.25□□□□□ -1.41
UBR4-212ENST00000475973 SPTBN2O15020 2390 aa6.24□□□□□ -1.41
UBR4-212ENST00000475973 A0A087WUJ7 227 aa6.24□□□□□ -1.41
UBR4-212ENST00000475973 ELOA3CA0A087WX78 387 aaPredicted RBP6.24□□□□□ -1.41
UBR4-212ENST00000475973 MFSD2BA6NFX1 497 aa6.24□□□□□ -1.41
UBR4-212ENST00000475973 ZSCAN5BA6NJL1 495 aa6.24□□□□□ -1.41
UBR4-212ENST00000475973 ELOA3DA6NLF2 546 aaPredicted RBP6.24□□□□□ -1.41
UBR4-212ENST00000475973 IFITM5A6NNB3 132 aa6.24□□□□□ -1.41
UBR4-212ENST00000475973 RIIAD1A6NNX1 92 aa6.24□□□□□ -1.41
UBR4-212ENST00000475973 EFCAB7A8K855 629 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms