RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 ZNF433Q8N7K0 673 aaPredicted RBP12.78□□□□□ -0.36
UBXN11-214ENST00000475591 YIPF7Q8N8F6 280 aa12.78□□□□□ -0.36
UBXN11-214ENST00000475591 ZNF501Q96CX3 271 aaPredicted RBP12.78□□□□□ -0.36
UBXN11-214ENST00000475591 SLC41A2Q96JW4 573 aa12.78□□□□□ -0.36
UBXN11-214ENST00000475591 MRPS17Q9Y2R5 130 aaKnown RBP12.78□□□□□ -0.36
UBXN11-214ENST00000475591 TP53BP1Q12888 1972 aaPredicted RBP12.78□□□□□ -0.36
UBXN11-214ENST00000475591 COL6A3P12111 3177 aa12.77□□□□□ -0.36
UBXN11-214ENST00000475591 C2orf72A6NCS6 295 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 INMT-MINDY4F8WBC2 141 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 SMLR1H3BR10 107 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 ARHGEF9O43307 516 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 UPK3AO75631 287 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 BGLAPP02818 100 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 ARSBP15848 533 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 GLB1P16278 677 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 SLC6A1P30531 599 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 SLC25A1P53007 311 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 ODF4Q2M2E3 257 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 CCDC58Q4VC31 144 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 LIPNQ5VXI9 398 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 PYHIN1Q6K0P9 492 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 LRRC69Q6ZNQ3 347 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.77□□□□□ -0.37
UBXN11-214ENST00000475591 OR1N1Q8NGS0 311 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 OR6N2Q8NGY6 317 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 ZNF671Q8TAW3 534 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 THAP3Q8WTV1 239 aaPredicted RBP12.77□□□□□ -0.37
UBXN11-214ENST00000475591 DAZLQ92904 295 aaKnown RBP12.77□□□□□ -0.37
UBXN11-214ENST00000475591 CCNL2Q96S94 520 aaPredicted RBP12.77□□□□□ -0.37
UBXN11-214ENST00000475591 FKRPQ9H9S5 495 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 SLC22A11Q9NSA0 550 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 TAS2R5Q9NYW4 299 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 MRTO4Q9UKD2 239 aaKnown RBP12.77□□□□□ -0.37
UBXN11-214ENST00000475591 CABIN1Q9Y6J0 2220 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 A0A1B0GX78 115 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 ZNF879B4DU55 563 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 GATBO75879 557 aaKnown RBP12.77□□□□□ -0.37
UBXN11-214ENST00000475591 DCNP07585 359 aaKnown RBP12.77□□□□□ -0.37
UBXN11-214ENST00000475591 SOX2P48431 317 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 PLA1AQ53H76 456 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 Q5BKY6 102 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 DPY19L4Q7Z388 723 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 YIPF5Q969M3 257 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 MAP6Q96JE9 813 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 SNX18Q96RF0 628 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 AMELYQ99218 206 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 NPAS1Q99742 590 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 PCED1AQ9H1Q7 454 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 ZCCHC4Q9H5U6 513 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 AUNIPQ9H7T9 357 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 MCUBQ9NWR8 336 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 FRRS1LQ9P0K9 344 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 COPS7AQ9UBW8 275 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 ZNF281Q9Y2X9 895 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 CACNG2Q9Y698 323 aa12.77□□□□□ -0.37
UBXN11-214ENST00000475591 TRAV6A0A075B6T7 132 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 OR6C70A6NIJ9 312 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 ALG1L2C9J202 215 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 CDC40O60508 579 aaKnown RBP eCLIP12.76□□□□□ -0.37
UBXN11-214ENST00000475591 SLC43A1O75387 559 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 TXNDC12O95881 172 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 IGF2P01344 180 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 HIST1H2ABP04908 130 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 APEHP13798 732 aaKnown RBP12.76□□□□□ -0.37
UBXN11-214ENST00000475591 AFF3P51826 1226 aaKnown RBP12.76□□□□□ -0.37
UBXN11-214ENST00000475591 STARD6P59095 220 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 COX15Q7KZN9 410 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 HIST3H2AQ7L7L0 130 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 SLC29A4Q7RTT9 530 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 OVCH1Q7RTY7 1134 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 NOXA1Q86UR1 476 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 RPS4Y2Q8TD47 263 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 HIST1H2ACQ93077 130 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 PTDSS2Q9BVG9 487 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 OR11A1Q9GZK7 315 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 IKZF2Q9UKS7 526 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 SLC6A5Q9Y345 797 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 ZNF354AO60765 605 aaPredicted RBP12.76□□□□□ -0.37
UBXN11-214ENST00000475591 ABHD16AO95870 558 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 PRKCAP17252 672 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 HSF2Q03933 536 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 SHBQ15464 509 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 NTRK2Q16620 822 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 BCL2L15Q5TBC7 163 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 CDC20BQ86Y33 519 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 SIAH3Q8IW03 269 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 SERPINA12Q8IW75 414 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 CMTM4Q8IZR5 234 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 SLC38A9Q8NBW4 561 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 OR10AC1Q8NH08 325 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 HAVCR2Q8TDQ0 301 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 ATOH1Q92858 354 aaPredicted RBP12.76□□□□□ -0.37
UBXN11-214ENST00000475591 CCDC74AQ96AQ1 378 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 FSCN3Q9NQT6 498 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 ABRACLQ9P1F3 81 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 TEKT2Q9UIF3 430 aa12.76□□□□□ -0.37
UBXN11-214ENST00000475591 PCDHGA9Q9Y5G4 932 aaKnown RBP12.76□□□□□ -0.37
UBXN11-214ENST00000475591 NUP210LQ5VU65 1888 aa12.75□□□□□ -0.37
UBXN11-214ENST00000475591 ARID1BQ8NFD5 2236 aaPredicted RBP12.75□□□□□ -0.37
UBXN11-214ENST00000475591 ORC5O43913 435 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms