RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ARHGAP11BQ3KRB8 267 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 RBMS3Q6XE24 437 aaKnown RBP17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 FAM122BQ7Z309 247 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 GRHL3Q8TE85 626 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 NUS1Q96E22 293 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 ZNF559Q9BR84 538 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 PTDSS2Q9BVG9 487 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 GPR174Q9BXC1 333 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 SLITRK2Q9H156 845 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 RRAGCQ9HB90 399 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 CXXC1Q9P0U4 656 aaPredicted RBP17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 SERTAD3Q9UJW9 196 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 ZNF780BQ9Y6R6 833 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 TICRRQ7Z2Z1 1910 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 A0A1B0GTI1 187 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 GRPRP30550 384 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 EFNB2P52799 333 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 SNRPEP62304 92 aaKnown RBP17■□□□□ 0.31
ECHDC1-214ENST00000474289 TAF13Q15543 124 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 C3orf33Q6P1S2 294 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 TMED4Q7Z7H5 227 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 COL26A1Q96A83 441 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 MRGPRX3Q96LB0 322 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 CHRNA9Q9UGM1 479 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 SCN3AQ9NY46 2000 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 TMEM82A0PJX8 343 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 PEX12O00623 359 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 IMPA2O14732 288 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 FADS1O60427 444 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 SLC25A4P12235 298 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 SYN1P17600 705 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 PNLIPRP2P54317 469 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 HTRA4P83105 476 aaPredicted RBP17■□□□□ 0.31
ECHDC1-214ENST00000474289 ZIC1Q15915 447 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 ZNF813Q6ZN06 617 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 ZNF704Q6ZNC4 412 aaPredicted RBP17■□□□□ 0.31
ECHDC1-214ENST00000474289 ACOT7LQ6ZUV0 252 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 TMPRSS9Q7Z410 1059 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 LRRTM1Q86UE6 522 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 SLC35F3Q8IY50 421 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 CCDC107Q8WV48 283 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 ING5Q8WYH8 240 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 HSPA12BQ96MM6 686 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 MBD2Q9UBB5 411 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 KCNE5Q9UJ90 142 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 FBXO4Q9UKT5 387 aa17■□□□□ 0.31
ECHDC1-214ENST00000474289 ABT1Q9ULW3 272 aaKnown RBP17■□□□□ 0.31
ECHDC1-214ENST00000474289 TBC1D3KA0A087X1G2 549 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 TBC1D3BA6NDS4 549 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 TBC1D3FA6NER0 549 aaPredicted RBP16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 HSD17B2P37059 387 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 PON3Q15166 354 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 Q499Y3 187 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 TBC1D3GQ6DHY5 549 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 STEAP1BQ6NZ63 245 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 AMZ2Q86W34 360 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 CLEC1AQ8NC01 280 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 SLC22A8Q8TCC7 542 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 TCEAL3Q969E4 200 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 SFXN1Q9H9B4 322 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 TM7SF3Q9NS93 570 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 F5H0A9 414 aaPredicted RBP16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 YKT6O15498 198 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 RAD1O60671 282 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 EIF1BO60739 113 aaKnown RBP16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 CTAG2O75638 210 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 MAS1P04201 325 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 HEXAP06865 529 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 NID1P14543 1247 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 CSRP1P21291 193 aaKnown RBP16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 NFYBP25208 207 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 AK4P27144 223 aaPredicted RBP16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 CASRP41180 1078 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 EIF1P41567 113 aaKnown RBP16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 DIO1P49895 249 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 GPR143P51810 404 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 PLEKHN1Q494U1 663 aaPredicted RBP16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 FAM109BQ6ICB4 259 aaPredicted RBP16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 ANKRD16Q6P6B7 361 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 DEFB128Q7Z7B8 93 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 OR1J4Q8NGS1 313 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 OR1J2Q8NGS2 313 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 OR6K6Q8NGW6 343 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 PPP1R1CQ8WVI7 109 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 COMMD9Q9P000 198 aa16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 DHCR7Q9UBM7 475 aaKnown RBP16.99■□□□□ 0.31
ECHDC1-214ENST00000474289 CCSO14618 274 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 FGF16O43320 207 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 RPP14O95059 124 aaKnown RBP16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 AGR2O95994 175 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 NGFRP08138 427 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 PRDX1Q06830 199 aaKnown RBP16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 LIPNQ5VXI9 398 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 NKAIN2Q5VXU1 208 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 ENPP7Q6UWV6 458 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 UNQ6126/PRO20091Q6UXV3 157 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 BIVMQ86UB2 503 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 PAQR8Q8TEZ7 354 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 EDAQ92838 391 aa16.98■□□□□ 0.31
ECHDC1-214ENST00000474289 SEC22AQ96IW7 307 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms