RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 IGHV3-35A0A0C4DH35 117 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 TCRBV9S1A1TA0A576 114 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 LRRIQ4A6NIV6 560 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF233A6NK53 670 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 FOXE1O00358 373 aaPredicted RBP3.26□□□□□ -1.89
BRCA1-212ENST00000473961 CETN3O15182 167 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 KLHL41O60662 606 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 LYPLA1O75608 230 aaPredicted RBP3.26□□□□□ -1.89
BRCA1-212ENST00000473961 ATP5HO75947 161 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 LYPD3O95274 346 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 FOLR2P14207 255 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 EIF2S2P20042 333 aaKnown RBP3.26□□□□□ -1.89
BRCA1-212ENST00000473961 GDF1P27539 372 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 NDUFA8P51970 172 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 ARPC4P59998 168 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 CXCL6P80162 114 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 CDK16Q00536 496 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 BCL2L1Q07817 233 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 SCRN3Q0VDG4 424 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 OXA1LQ15070 435 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 PRR4Q16378 134 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 C15orf32Q32M92 178 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 CCDC153Q494R4 210 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 KCTD16Q68DU8 428 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 BAIAP2L2Q6UXY1 529 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 C3orf62Q6ZUJ4 267 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 PGAP1Q75T13 922 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 GTSCR1Q86UQ5 136 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 PPP1R27Q86WC6 154 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 ERI1Q8IV48 349 aaKnown RBP3.26□□□□□ -1.89
BRCA1-212ENST00000473961 GPR65Q8IYL9 337 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 FTMTQ8N4E7 242 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 OR4C5Q8NGB2 326 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 DNAJC9Q8WXX5 260 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 HAUS1Q96CS2 278 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 CHMP6Q96FZ7 201 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 OLFM3Q96PB7 478 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 CNN2Q99439 309 aaKnown RBP3.26□□□□□ -1.89
BRCA1-212ENST00000473961 CHP1Q99653 195 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 SH3GL1Q99961 368 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 GAL3ST1Q99999 423 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 CNPY3Q9BT09 278 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 MTG1Q9BT17 334 aaPredicted RBP3.26□□□□□ -1.89
BRCA1-212ENST00000473961 CHIAQ9BZP6 476 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 SELENOIQ9C0D9 397 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 NSRP1Q9H0G5 558 aaKnown RBP3.26□□□□□ -1.89
BRCA1-212ENST00000473961 NEK6Q9HC98 313 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 ADAM22Q9P0K1 906 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 PAK5Q9P286 719 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 POGZQ7Z3K3 1410 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 TARBP1Q13395 1621 aaKnown RBP3.26□□□□□ -1.89
BRCA1-212ENST00000473961 MYO3AQ8NEV4 1616 aa3.26□□□□□ -1.89
BRCA1-212ENST00000473961 JCADQ9P266 1359 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 MAST1Q9Y2H9 1570 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 USP42Q9H9J4 1324 aaKnown RBP3.25□□□□□ -1.89
BRCA1-212ENST00000473961 ABCC6O95255 1503 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 SPHKAPQ2M3C7 1700 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 IGLV8-61A0A075B6I0 122 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 A0A087WWV3 80 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF705EA8MWA4 302 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-212ENST00000473961 TCP11X1B4DZS4 312 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 LOC110117498-PIK3R3F6TDL0 507 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 CASQ2O14958 399 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-212ENST00000473961 RNF13O43567 381 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 TOM1O60784 492 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 ZNF254O75437 659 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 SUPT3HO75486 399 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 UPK3AO75631 287 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 KLK3P07288 261 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-212ENST00000473961 CRYGBP07316 175 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 IGLL1P15814 213 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 TCP1P17987 556 aaKnown RBP3.25□□□□□ -1.89
BRCA1-212ENST00000473961 HSPA9P38646 679 aaKnown RBP3.25□□□□□ -1.89
BRCA1-212ENST00000473961 SYKP43405 635 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 ATP5OP48047 213 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 RGS8P57771 180 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-212ENST00000473961 LMO4P61968 165 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 STK38Q15208 465 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 BCL2A1Q16548 175 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 AANATQ16613 207 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 DUSP7Q16829 419 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 MICBQ29980 383 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 PARP15Q460N3 678 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 XKR7Q5GH72 579 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 OR2B11Q5JQS5 317 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 ATAD3CQ5T2N8 411 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 CROCCP2Q86T23 111 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 NAXDQ8IW45 347 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 SLC39A11Q8N1S5 342 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 CCDC71LQ8N9Z2 235 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 FNDC5Q8NAU1 212 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 LINC00301Q8NCQ3 95 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 OR56B4Q8NH76 319 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 SLC22A8Q8TCC7 542 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 LRRC45Q96CN5 670 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 PLEKHA8Q96JA3 519 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 HIST1H4GQ99525 98 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 PAXXQ9BUH6 204 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 PPA2Q9H2U2 334 aa3.25□□□□□ -1.89
BRCA1-212ENST00000473961 FOLH1BQ9HBA9 442 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms