RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 IGF2P01344 180 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 FUT1P19526 365 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 ZNF83P51522 516 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 ZP4Q12836 540 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 KEAP1Q14145 624 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 ACKR1Q16570 336 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 NANOGNBQ7Z5D8 188 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 ABHD12BQ7Z5M8 362 aaPredicted RBP16.59■□□□□ 0.25
PTCD3-210ENST00000473829 MEX3DQ86XN8 651 aaKnown RBP16.59■□□□□ 0.25
PTCD3-210ENST00000473829 KBTBD8Q8NFY9 601 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 MBD6Q96DN6 1003 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 SGTBQ96EQ0 304 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 NSL1Q96IY1 281 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 HS6ST2Q96MM7 605 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 FNDC11Q9BVV2 318 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 C1QTNF6Q9BXI9 259 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 ESRP2Q9H6T0 727 aaKnown RBP16.59■□□□□ 0.25
PTCD3-210ENST00000473829 GORASP2Q9H8Y8 452 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 GPR35Q9HC97 309 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 NGBQ9NPG2 151 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 MED31Q9Y3C7 131 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 RNF115Q9Y4L5 304 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 ENPP4Q9Y6X5 453 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 V9GYQ6 96 aa16.59■□□□□ 0.25
PTCD3-210ENST00000473829 PRRC2AP48634 2157 aaKnown RBP16.59■□□□□ 0.25
PTCD3-210ENST00000473829 VPS13CQ709C8 3753 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 B2RBV5 119 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 RPL36A-HNRNPH2H7BZ11 118 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 CLOCKO15516 846 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 OR6A2O95222 327 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 CD3EP07766 207 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 IFNGR1P15260 489 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 TGFBR3Q03167 851 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 RPL18Q07020 188 aaKnown RBP16.58■□□□□ 0.24
PTCD3-210ENST00000473829 SPOCK1Q08629 439 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 CAMK2DQ13557 499 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 MELKQ14680 651 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 TBRG1Q3YBR2 411 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 ADAM5Q6NVV9 412 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 RINLQ6ZS11 566 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 C20orf196Q8IYI0 205 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 GPR137CQ8N3F9 429 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 PIK3C3Q8NEB9 887 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 BCL2L2Q92843 193 aaPredicted RBP16.58■□□□□ 0.24
PTCD3-210ENST00000473829 BOD1Q96IK1 185 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 C7orf34Q96L11 122 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 NDE1Q9NXR1 346 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 MAGEL2Q9UJ55 1249 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 SAMD4AQ9UPU9 718 aaKnown RBP16.58■□□□□ 0.24
PTCD3-210ENST00000473829 DSCAMO60469 2012 aa16.58■□□□□ 0.24
PTCD3-210ENST00000473829 M0R3G1 203 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 RNF13O43567 381 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 SEMG1P04279 462 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 HIST1H2ABP04908 130 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 MNAT1P51948 309 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 BIDP55957 195 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 VLDLRP98155 873 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 TRAM2Q15035 370 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 CEACAM16Q2WEN9 425 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 DEFB113Q30KQ7 82 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 HMBOX1Q6NT76 420 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 SLC35D2Q76EJ3 337 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 HIST3H2AQ7L7L0 130 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 NRMQ8IXM6 262 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 ANKK1Q8NFD2 765 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 MOSPD2Q8NHP6 518 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 BCAS4Q8TDM0 211 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 LIPHQ8WWY8 451 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 AKAP1Q92667 903 aaKnown RBP eCLIP16.57■□□□□ 0.24
PTCD3-210ENST00000473829 HIST1H2ACQ93077 130 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 FOXC2Q99958 501 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 CXXC4Q9H2H0 198 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 CRLF2Q9HC73 371 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 NDUFAF4Q9P032 175 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 AMDHD2Q9Y303 409 aa16.57■□□□□ 0.24
PTCD3-210ENST00000473829 A0A087WUU8 490 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 A0A096LPE4 126 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 A0A1W2PPZ6 126 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 SHISA9B4DS77 424 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 BLOC1S5-TXNDC5H3BN57 136 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 hCG_2039718K7EN88 272 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 M0R1B8 84 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 HS3ST1O14792 307 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 SEC14L2O76054 403 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 DIRAS1O95057 198 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 F13BP05160 661 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 TSPAN19P0C672 248 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 IFI30P13284 250 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 MAKP20794 623 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 CALB2P22676 271 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 IFNA8P32881 189 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 AQP2P41181 271 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 TUBA1BP68363 451 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 TUBA4AP68366 448 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 ARF1P84077 181 aaKnown RBP16.56■□□□□ 0.24
PTCD3-210ENST00000473829 IQCCQ4KMZ1 466 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 TBPL2Q6SJ96 375 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 TUBA1AQ71U36 451 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 SSX8Q7RTT4 187 aa16.56■□□□□ 0.24
PTCD3-210ENST00000473829 IGFBPL1Q8WX77 278 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms