RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 ATP6V1E1P36543 226 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 DIO1P49895 249 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 MEOX1P50221 254 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 TNFSF10P50591 281 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 BLVRAP53004 296 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 B3GALT5-AS1P59052 145 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 RPS7P62081 194 aaKnown RBP11.52□□□□□ -0.57
VPS13D-205ENST00000473099 C1DQ13901 141 aaKnown RBP11.52□□□□□ -0.57
VPS13D-205ENST00000473099 KLHL12Q53G59 568 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 PDSS1Q5T2R2 415 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 GTF2IRD2BQ6EKJ0 949 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 LEG1Q6P5S2 330 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 ESPNLQ6ZVH7 1005 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 ASB18Q6ZVZ8 466 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 ZNF367Q7RTV3 350 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 GALNTL5Q7Z4T8 443 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 BCDIN3DQ7Z5W3 292 aaKnown RBP11.52□□□□□ -0.57
VPS13D-205ENST00000473099 GTF2IRD2Q86UP8 949 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 SLC22A16Q86VW1 577 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 POMGNT2Q8NAT1 580 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 ZFP62Q8NB50 900 aaPredicted RBP11.52□□□□□ -0.57
VPS13D-205ENST00000473099 PROKR2Q8NFJ6 384 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 OR5M1Q8NGP8 315 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 OR13F1Q8NGS4 319 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 ZNF420Q8TAQ5 688 aaPredicted RBP11.52□□□□□ -0.57
VPS13D-205ENST00000473099 PTP4A1Q93096 173 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 RASD2Q96D21 266 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 DGCR14Q96DF8 476 aaKnown RBP11.52□□□□□ -0.57
VPS13D-205ENST00000473099 TSPAN32Q96QS1 320 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 DDOQ99489 341 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 TEAD3Q99594 435 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 SMAD5Q99717 465 aaKnown RBP11.52□□□□□ -0.57
VPS13D-205ENST00000473099 MND1Q9BWT6 205 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 TTTY12Q9BZ98 90 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 NMNAT2Q9BZQ4 307 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 TNFRSF10DQ9UBN6 386 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 ZNF346Q9UL40 294 aaKnown RBP11.52□□□□□ -0.57
VPS13D-205ENST00000473099 NPIPA1Q9UND3 350 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 RASD1Q9Y272 281 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 PCDHGA9Q9Y5G4 932 aaKnown RBP11.52□□□□□ -0.57
VPS13D-205ENST00000473099 COMMD3-BMI1R4GMX3 469 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 CFAP47Q6ZTR5 3102 aa11.52□□□□□ -0.57
VPS13D-205ENST00000473099 URB1O60287 2271 aaKnown RBP11.51□□□□□ -0.57
VPS13D-205ENST00000473099 APC2O95996 2303 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 CHD6Q8TD26 2715 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 TRAV17A0A0B4J275 112 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 PINLYPA6NC86 204 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 AQP7P3A6NL99 342 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 MS4A18H0YCH9 400 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 MYL12BO14950 172 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 NOL3O60936 208 aaKnown RBP11.51□□□□□ -0.57
VPS13D-205ENST00000473099 GLSO94925 669 aaPredicted RBP11.51□□□□□ -0.57
VPS13D-205ENST00000473099 IGHA1P01876 353 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 RFPL3SP0C7P2 107 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 SPINK2P20155 84 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 CAPZA2P47755 286 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 ACTC1P68032 377 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 ACTA1P68133 377 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 HSF1Q00613 529 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 GGTLC2Q14390 218 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 PON3Q15166 354 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 ACKR1Q16570 336 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 MS4A18Q3C1V0 323 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 YRDCQ86U90 279 aaKnown RBP11.51□□□□□ -0.57
VPS13D-205ENST00000473099 UEVLDQ8IX04 471 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 CYB561A3Q8NBI2 242 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 BBS1Q8NFJ9 593 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 OR2T4Q8NH00 348 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 ZNF519Q8TB69 540 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 MRPL48Q96GC5 212 aaKnown RBP11.51□□□□□ -0.57
VPS13D-205ENST00000473099 OXGR1Q96P68 337 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 UBL7Q96S82 380 aaPredicted RBP11.51□□□□□ -0.57
VPS13D-205ENST00000473099 NMNAT3Q96T66 252 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 OR51V1Q9H2C8 321 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 TMEM185BQ9H7F4 350 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 MED20Q9H944 212 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 ACKR4Q9NPB9 350 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 TIGARQ9NQ88 270 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 FKBP7Q9Y680 259 aa11.51□□□□□ -0.57
VPS13D-205ENST00000473099 A0A1W2PNR3 127 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 TMEM129A0AVI4 362 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 TMEM8BA6NDV4 472 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 CCDC182A6NF36 153 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 CCDC160A6NGH7 325 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 RRP8O43159 456 aaKnown RBP11.5□□□□□ -0.57
VPS13D-205ENST00000473099 TRMUO75648 421 aaKnown RBP11.5□□□□□ -0.57
VPS13D-205ENST00000473099 GLCEO94923 617 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 AKR7A3O95154 331 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 BCL10O95999 233 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 NR2C1P13056 603 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 SPI1P17947 270 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 POU3F2P20265 443 aaPredicted RBP11.5□□□□□ -0.57
VPS13D-205ENST00000473099 SHC1P29353 583 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 GSTT1P30711 240 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 ACVR1BP36896 505 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 CDKN2AP42771 156 aaKnown RBP11.5□□□□□ -0.57
VPS13D-205ENST00000473099 MAP2K4P45985 399 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 SLC16A1P53985 500 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 GFRA1P56159 465 aa11.5□□□□□ -0.57
VPS13D-205ENST00000473099 RAC3P60763 192 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms