RNA–Protein interactions for RNA: ENST00000472977.6

CTSS-203, Transcript of cathepsin S, humanhuman

TSL 5

Gene CTSS, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-203ENST00000472977 UBA3Q8TBC4 463 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 ZPLD1Q8TCW7 415 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 FCAMRQ8WWV6 532 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 CELF6Q96J87 481 aaKnown RBP3.34□□□□□ -1.87
CTSS-203ENST00000472977 JSRP1Q96MG2 331 aaPredicted RBP3.34□□□□□ -1.87
CTSS-203ENST00000472977 ZNF75AQ96N20 296 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 OR5B2Q96R09 309 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 CYP2S1Q96SQ9 504 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 UTP23Q9BRU9 249 aaKnown RBP3.34□□□□□ -1.87
CTSS-203ENST00000472977 MED10Q9BTT4 135 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 NHEJ1Q9H9Q4 299 aaPredicted RBP3.34□□□□□ -1.87
CTSS-203ENST00000472977 ZC4H2Q9NQZ6 224 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 NECAP2Q9NVZ3 263 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 ZNF446Q9NWS9 450 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 NKIRAS1Q9NYS0 192 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 EMC3Q9P0I2 261 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 ERVW-1Q9UQF0 538 aa3.34□□□□□ -1.87
CTSS-203ENST00000472977 YARS2Q9Y2Z4 477 aaKnown RBP3.34□□□□□ -1.87
CTSS-203ENST00000472977 CACNA1FO60840 1977 aa3.34□□□□□ -1.88
CTSS-203ENST00000472977 TRBV5-4A0A0C4DH59 114 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 A0A1B0GW55 424 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 FAM231BA6NCW3 169 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 KRTAP16-1A8MUX0 517 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 TRDCB7Z8K6 153 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 NPIPB9F8W1W9 429 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 C16orf97H3BN30 126 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 MKRN2OSH3BPM6 223 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 SLC9A3R1O14745 358 aaPredicted RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 TRAPPC3O43617 180 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 HSBP1O75506 76 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 LYPD3O95274 346 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 FGGP02679 453 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 ALDOBP05062 364 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 DUX4L2P0CJ85 424 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 DUX4L3P0CJ86 424 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 DUX4L4P0CJ87 422 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 DUX4L5P0CJ88 424 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 DUX4L6P0CJ89 424 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 DUX4L7P0CJ90 424 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 IGHV4-38-2P0DP08 117 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 BCKDHAP12694 445 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 FGF9P31371 208 aaPredicted RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 EPHX2P34913 555 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 UGT2B10P36537 528 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 ACVR1BP36896 505 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 LEPP41159 167 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 P2RY2P41231 377 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 SLC1A1P43005 524 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 IL9RQ01113 521 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 KDSRQ06136 332 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 ZNF33AQ06730 810 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 VAMP3Q15836 100 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 C5orf47Q569G3 176 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 PVRIGQ6DKI7 326 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 DUX4L9Q6RFH8 374 aaPredicted RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 PGAP1Q75T13 922 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 IQCKQ8N0W5 287 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 JAGN1Q8N5M9 183 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 C15orf54Q8N8G6 183 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 OR10V1Q8NGI7 309 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 OR13A1Q8NGR1 328 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 OR6F1Q8NGZ6 308 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 LNX1Q8TBB1 728 aaPredicted RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 GATAD1Q8WUU5 269 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 CDKL2Q92772 493 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 UFD1Q92890 307 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 ZNF524Q96C55 264 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 ECHDC3Q96DC8 303 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 DUS3LQ96G46 650 aaKnown RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 MS4A4EQ96PG1 132 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 TNFRSF13CQ96RJ3 184 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 NKX3-1Q99801 234 aaPredicted RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 ULBP2Q9BZM5 246 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 SHCBP1LQ9BZQ2 653 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 NAT10Q9H0A0 1025 aaKnown RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 LIME1Q9H400 295 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 NXF3Q9H4D5 531 aaKnown RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 RNF41Q9H4P4 317 aaPredicted RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 LRRC19Q9H756 370 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 KIR3DX1Q9H7L2 352 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 IMP3Q9NV31 184 aaKnown RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 THUMPD1Q9NXG2 353 aaKnown RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 RBAKQ9NYW8 714 aaPredicted RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 WRAP73Q9P2S5 460 aaPredicted RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 DUX4Q9UBX2 424 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 KLK11Q9UBX7 282 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 KIF25Q9UIL4 384 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 PSMD13Q9UNM6 376 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 RCL1Q9Y2P8 373 aaKnown RBP3.33□□□□□ -1.88
CTSS-203ENST00000472977 SELENOKQ9Y6D0 94 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 PRSS21Q9Y6M0 314 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 CDH10Q9Y6N8 788 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 CNTNAP1P78357 1384 aa3.33□□□□□ -1.88
CTSS-203ENST00000472977 IGLV3-22A0A075B6J6 115 aa3.32□□□□□ -1.88
CTSS-203ENST00000472977 IGHV4-61A0A0C4DH41 118 aa3.32□□□□□ -1.88
CTSS-203ENST00000472977 MSGN1A6NI15 193 aa3.32□□□□□ -1.88
CTSS-203ENST00000472977 IDSB3KWA1 339 aa3.32□□□□□ -1.88
CTSS-203ENST00000472977 E7EWF7 191 aa3.32□□□□□ -1.88
CTSS-203ENST00000472977 RNASEK-C17orf49H0YIS7 233 aa3.32□□□□□ -1.88
CTSS-203ENST00000472977 KLRC4-KLRK1H3BQV0 150 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms