RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 DACH2Q96NX9 599 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 LINC00470Q9BZP3 86 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 REEP1Q9H902 201 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 CCM2LQ9NUG4 571 aaPredicted RBP18.35■□□□□ 0.53
TOP3A-204ENST00000472959 LYVE1Q9Y5Y7 322 aa18.35■□□□□ 0.53
TOP3A-204ENST00000472959 UTP20O75691 2785 aaKnown RBP18.35■□□□□ 0.53
TOP3A-204ENST00000472959 A0A1W2PRG6 482 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 SERPINI2O75830 405 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 KRT33AO76009 404 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 IFNGR1P15260 489 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 IGHV1-2P23083 117 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 IL32P24001 234 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 CCKARP32238 428 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 GPR4P46093 362 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 FAPQ12884 760 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 SLC35D2Q76EJ3 337 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 YTHDF3Q7Z739 585 aaKnown RBP18.34■□□□□ 0.53
TOP3A-204ENST00000472959 MEX3DQ86XN8 651 aaKnown RBP18.34■□□□□ 0.53
TOP3A-204ENST00000472959 TMEM123Q8N131 208 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 PAPD5Q8NDF8 572 aaKnown RBP18.34■□□□□ 0.53
TOP3A-204ENST00000472959 LINC01560Q8TB33 94 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 MARVELD3Q96A59 401 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 FAM46AQ96IP4 442 aaKnown RBP18.34■□□□□ 0.53
TOP3A-204ENST00000472959 RSRC1Q96IZ7 334 aaKnown RBP18.34■□□□□ 0.53
TOP3A-204ENST00000472959 TXNDC15Q96J42 360 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 LRR1Q96L50 414 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 OR2M2Q96R28 347 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 INIPQ9NRY2 104 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 MED29Q9NX70 200 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 TAS2R16Q9NYV7 291 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 CRIM1Q9NZV1 1036 aa18.34■□□□□ 0.53
TOP3A-204ENST00000472959 SH3D21A4FU49 640 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 SLC35F4A4IF30 521 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 NPIPB13A6NJU9 1138 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 NPIPB4C9JG80 1138 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 PDLIM1O00151 329 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 CDC42EP2O14613 210 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 OR10H3O60404 316 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 EPXP11678 715 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 PRPS1P60891 318 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 LAPTM4AQ15012 233 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 TAF11Q15544 211 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 ZBED5Q49AG3 693 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 ALG10Q5BKT4 473 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 ZNF787Q6DD87 383 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 BHLHA15Q7RTS1 189 aaPredicted RBP18.33■□□□□ 0.52
TOP3A-204ENST00000472959 HDDC2Q7Z4H3 204 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 ZNF433Q8N7K0 673 aaPredicted RBP18.33■□□□□ 0.52
TOP3A-204ENST00000472959 OR4C15Q8NGM1 316 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 OR13C2Q8NGS9 318 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 OR51A7Q8NH64 312 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 OR6X1Q8NH79 312 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 MOSPD2Q8NHP6 518 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 WFIKKN1Q96NZ8 548 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 TNFRSF13CQ96RJ3 184 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 MED18Q9BUE0 208 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 NDEL1Q9GZM8 345 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 ACTR6Q9GZN1 396 aa18.33■□□□□ 0.52
TOP3A-204ENST00000472959 SAMHD1Q9Y3Z3 626 aaKnown RBP18.33■□□□□ 0.52
TOP3A-204ENST00000472959 MAST4O15021 2626 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 ZNF587BE7ETH6 402 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 CLOCKO15516 846 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 FKBP6O75344 327 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 BCL10O95999 233 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 CST1P01037 141 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 F13BP05160 661 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 MPGP29372 298 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 DNAJA1P31689 397 aaKnown RBP18.32■□□□□ 0.52
TOP3A-204ENST00000472959 DAP3P51398 398 aaKnown RBP18.32■□□□□ 0.52
TOP3A-204ENST00000472959 BIDP55957 195 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 TGFBR3Q03167 851 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 FHL1Q13642 323 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 ZER1Q7Z7L7 766 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 GPR137CQ8N3F9 429 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 UTP4Q969X6 686 aaKnown RBP18.32■□□□□ 0.52
TOP3A-204ENST00000472959 EMC6Q9BV81 110 aa18.32■□□□□ 0.52
TOP3A-204ENST00000472959 STX18Q9P2W9 335 aaKnown RBP18.32■□□□□ 0.52
TOP3A-204ENST00000472959 TRAV27A0A087WT01 109 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 CASKO14936 926 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 KLF4O43474 513 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 PTP4A3O75365 173 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 UPK3AO75631 287 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 LYZL6O75951 148 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 FPR3P25089 353 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 GABPB1Q06547 395 aaPredicted RBP18.31■□□□□ 0.52
TOP3A-204ENST00000472959 DAZAP2Q15038 168 aaPredicted RBP18.31■□□□□ 0.52
TOP3A-204ENST00000472959 ANKRD34AQ69YU3 496 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 OR7E24Q6IFN5 339 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 C1orf94Q6P1W5 598 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 SSX8Q7RTT4 187 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 P2RY8Q86VZ1 359 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 C20orf196Q8IYI0 205 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 C1orf162Q8NEQ5 155 aaPredicted RBP18.31■□□□□ 0.52
TOP3A-204ENST00000472959 HSD17B8Q92506 261 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 SLCO4A1Q96BD0 722 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 S100PBPQ96BU1 408 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 C14orf79Q96F83 325 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 SLC25A44Q96H78 314 aaPredicted RBP18.31■□□□□ 0.52
TOP3A-204ENST00000472959 B3GAT2Q9NPZ5 323 aa18.31■□□□□ 0.52
TOP3A-204ENST00000472959 ZNF226Q9NYT6 803 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms