RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PIK3R3Q92569 461 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 PMM1Q92871 262 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 FAM120BQ96EK7 910 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 ANKRD27Q96NW4 1050 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ZIM3Q96PE6 472 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 OR5B2Q96R09 309 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 NAA11Q9BSU3 229 aaPredicted RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 KATNB1Q9BVA0 655 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 PTDSS2Q9BVG9 487 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 SF3B5Q9BWJ5 86 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 ARMC7Q9H6L4 198 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 COQ10BQ9H8M1 238 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ANKRA2Q9H9E1 313 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 GRPEL1Q9HAV7 217 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 EXOSC3Q9NQT5 275 aaKnown RBP3.06□□□□□ -1.92
XRN1-209ENST00000472625 SH3BP4Q9P0V3 963 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 CHRNA9Q9UGM1 479 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ATP6V1HQ9UI12 483 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ZNF225Q9UK10 706 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 FBXL3Q9UKT7 428 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 ICAM5Q9UMF0 924 aa3.06□□□□□ -1.92
XRN1-209ENST00000472625 SONP18583 2426 aaKnown RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 EML6Q6ZMW3 1958 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 RAI1Q7Z5J4 1906 aaPredicted RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 GXYLT2A0PJZ3 443 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 TMEM247A6NEH6 219 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 DPRXA6NFQ7 191 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 SERINC4A6NH21 518 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 B4DXG7 233 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF814B7Z6K7 855 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF587BE7ETH6 402 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 M0R1B8 84 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 PPP6CO00743 305 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 COPEO14579 308 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 LSM1O15116 133 aaKnown RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 SMAD9O15198 467 aaKnown RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 CFLARO15519 480 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF208O43345 1280 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 KRT33AO76009 404 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 CSTAP01040 98 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 IGKV1D-16P01601 117 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 GPIP06744 558 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 IGHV4-31P0DP07 118 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 TFPIP10646 304 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ACP2P11117 423 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF23P17027 643 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 SDC1P18827 310 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 IGHV1-2P23083 117 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 IGFBP5P24593 272 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 GTF2E2P29084 291 aaKnown RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 MPGP29372 298 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 SOAT1P35610 550 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 CCT3P49368 545 aaKnown RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 KHKP50053 298 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 HTR6P50406 440 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 IDH3GP51553 393 aaPredicted RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 COPZ1P61923 177 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 RPS23P62266 143 aaKnown RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 IRX1P78414 480 aaPredicted RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 MERTKQ12866 999 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 SKP2Q13309 424 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 GGTLC2Q14390 218 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 CD226Q15762 336 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 EFNB3Q15768 340 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 SMU1Q2TAY7 513 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 KRTAP24-1Q3LI83 254 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 RFTN2Q52LD8 501 aaPredicted RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 FAM120AOSQ5T036 256 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ANXA8L1Q5VT79 327 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 RGS7BPQ6MZT1 257 aaPredicted RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 PAQR6Q6TCH4 344 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 C5orf46Q6UWT4 87 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 APOOLQ6UXV4 268 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 C12orf54Q6X4T0 127 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF66Q6ZN08 573 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF551Q7Z340 670 aaPredicted RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 NUFIP2Q7Z417 695 aaKnown RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 KCTD20Q7Z5Y7 419 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 MEX3DQ86XN8 651 aaKnown RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 DDIASQ8IXT1 998 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 IFT20Q8IY31 132 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 CCDC36Q8IYA8 594 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF440Q8IYI8 595 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 LRRC34Q8IZ02 419 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ARFGAP2Q8N6H7 521 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF525Q8N782 197 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF433Q8N7K0 673 aaPredicted RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 FNDC5Q8NAU1 212 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 MAPK1IP1LQ8NDC0 245 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 NUP37Q8NFH4 326 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 OR52N5Q8NH56 324 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 LILRB1Q8NHL6 650 aaPredicted RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 FBXO30Q8TB52 745 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 GPR119Q8TDV5 335 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 ZNF418Q8TF45 676 aaPredicted RBP3.05□□□□□ -1.92
XRN1-209ENST00000472625 IFT81Q8WYA0 676 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.05□□□□□ -1.92
XRN1-209ENST00000472625 CDS1Q92903 461 aa3.05□□□□□ -1.92
XRN1-209ENST00000472625 CIDECQ96AQ7 238 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms