RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, human

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-209	ENST00000472044	TET2	Q6N021	2002 aa	Predicted RBP	2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	LRP4	O75096	1905 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	IGHV3-64D	A0A0J9YX35	117 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	FAM166B	A8MTA8	275 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	MGRN1	O60291	552 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	CA11	O75493	328 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	UPK3A	O75631	287 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	TNFSF13	O75888	250 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	C1orf105	O95561	183 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	TMEM50A	O95807	157 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	GIP	P09681	153 aa	Predicted RBP	2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	TCN1	P20061	433 aa	Predicted RBP	2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	RDX	P35241	583 aa	Known RBP	2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	FBXW4	P57775	412 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	MECOM	Q03112	1051 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	UNC119	Q13432	240 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	LRRC10	Q5BKY1	277 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	CYB5R2	Q6BCY4	276 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	TRIM40	Q6P9F5	258 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	CAMK2N1	Q7Z7J9	78 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	ZNF429	Q86V71	674 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	NBPF5P	Q86XG9	351 aa	Predicted RBP	2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	PSTK	Q8IV42	348 aa	Known RBP	2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	ZNF433	Q8N7K0	673 aa	Predicted RBP	2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	MDS2	Q8NDY4	140 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	OR2L3	Q8NG85	312 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	OR4F15	Q8NGB8	312 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	OR4F6	Q8NGB9	312 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	OR2G3	Q8NGZ4	309 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	FBXO32	Q969P5	355 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	TUBGCP3	Q96CW5	907 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	PLEKHA8	Q96JA3	519 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	OR8B4	Q96RC9	309 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	SORT1	Q99523	831 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	SH3GL1	Q99961	368 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	SLC25A37	Q9NYZ2	338 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	SPATA7	Q9P0W8	599 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	HPCAL4	Q9UM19	191 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	PRG3	Q9Y2Y8	225 aa	Predicted RBP	2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	IKBKG	Q9Y6K9	419 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	PDS5B	Q9NTI5	1447 aa		2.47	□□□□□ -2.01
PTCD3-209	ENST00000472044	TRBV6-6	A0A0A6YYG2	114 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	KIR2DL5B	A0A0G2JN68	375 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	KIR2DL5B	A0A0G2JPC4	375 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	ARHGEF35	A5YM69	484 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	BTBD17	A6NE02	478 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	PES1	O00541	588 aa	Known RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	MPHOSPH10	O00566	681 aa	Known RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	PEX7	O00628	323 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	PCCA	P05165	728 aa	Predicted RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	C2	P06681	752 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	HOXC4	P09017	264 aa	Predicted RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	UBTFL1	P0CB47	393 aa	Predicted RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	RPS2	P15880	293 aa	Known RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	NCF2	P19878	526 aa	Predicted RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	KITLG	P21583	273 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	GPR6	P46095	362 aa	Predicted RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	RPS10	P46783	165 aa	Known RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	TFPI2	P48307	235 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	ATP5I	P56385	69 aa	Predicted RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	ACVR1	Q04771	509 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	BST2	Q10589	180 aa	Known RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	ARHGAP19	Q14CB8	494 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	SSX2	Q16385	188 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	RABL6	Q3YEC7	729 aa	Predicted RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	PRAMEF5	Q5TYX0	476 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	PRAMEF6	Q5VXH4	476 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	LRRC74B	Q6ZQY2	392 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	ZNF621	Q6ZSS3	439 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	C6orf120	Q7Z4R8	191 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	TMEM135	Q86UB9	458 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	CDR2L	Q86X02	465 aa	Predicted RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	KIR2DL5A	Q8N109	375 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	UBE2J2	Q8N2K1	259 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	ZADH2	Q8N4Q0	377 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	NECAB1	Q8N987	351 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	ZNF557	Q8N988	423 aa	Predicted RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044		Q8N9L7	120 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	OR51G1	Q8NGK1	321 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	OR1L6	Q8NGR2	347 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	KIR2DL5B	Q8NHK3	375 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	MCOLN3	Q8TDD5	553 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	STMN2	Q93045	179 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	RNF185	Q96GF1	192 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	KCTD14	Q9BQ13	255 aa	Predicted RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	PKIB	Q9C010	78 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	ADAP2	Q9NPF8	381 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	STOX2	Q9P2F5	926 aa	Predicted RBP	2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044	IKZF2	Q9UKS7	526 aa		2.46	□□□□□ -2.02
PTCD3-209	ENST00000472044		A6NDX4	124 aa		2.45	□□□□□ -2.02
PTCD3-209	ENST00000472044	ERVV-1	B6SEH8	477 aa		2.45	□□□□□ -2.02
PTCD3-209	ENST00000472044	LAD1	O00515	517 aa		2.45	□□□□□ -2.02
PTCD3-209	ENST00000472044	CCL21	O00585	134 aa		2.45	□□□□□ -2.02
PTCD3-209	ENST00000472044	SERPINA3	P01011	423 aa		2.45	□□□□□ -2.02
PTCD3-209	ENST00000472044	PNMA6A	P0CW24	399 aa	Predicted RBP	2.45	□□□□□ -2.02
PTCD3-209	ENST00000472044	MCF2	P10911	925 aa		2.45	□□□□□ -2.02
PTCD3-209	ENST00000472044	TOP1	P11387	765 aa	Known RBP	2.45	□□□□□ -2.02
PTCD3-209	ENST00000472044	ADRB3	P13945	408 aa		2.45	□□□□□ -2.02
PTCD3-209	ENST00000472044	CCNC	P24863	283 aa		2.45	□□□□□ -2.02
PTCD3-209	ENST00000472044	SLC26A3	P40879	764 aa		2.45	□□□□□ -2.02

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