RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 INTS6Q9UL03 887 aaKnown RBP12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MUC4Q99102 2169 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF593O00488 134 aaPredicted RBP12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SELENOWP63302 87 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 POU4F3Q15319 338 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HBMQ6B0K9 141 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HSD17B13Q7Z5P4 300 aaPredicted RBP12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TRIB3Q96RU7 358 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PCYT2Q99447 389 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CDCP1Q9H5V8 836 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PADI1Q9ULC6 663 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 LHX6Q9UPM6 363 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF443Q9Y2A4 671 aaPredicted RBP12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DNAJC15Q9Y5T4 150 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NAV1Q8NEY1 1877 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 J3QR89 54 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NPSR1Q6W5P4 371 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ENDOVQ8N8Q3 282 aaKnown RBP12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FAM213BQ8TBF2 198 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF587Q96SQ5 575 aaPredicted RBP12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HEYLQ9NQ87 328 aaPredicted RBP12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ACSS1Q9NUB1 689 aaPredicted RBP12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HCSTQ9UBK5 93 aa12.31□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 RNF212BA8MTL3 300 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR8U8P0C7N1 319 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ATP4BP51164 291 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CAMK2BQ13554 666 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TAZQ16635 292 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PHLDA2Q53GA4 152 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 WBP2NLQ6ICG8 309 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 APOOLQ6UXV4 268 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CPEB3Q8NE35 698 aaKnown RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ANKRD9Q96BM1 317 aaPredicted RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MYADMQ96S97 322 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 IER2Q9BTL4 223 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TXNL4BQ9NX01 149 aaKnown RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MED1Q15648 1581 aaPredicted RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 BCL9LQ86UU0 1499 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 RPS10-NUDT3A0A1W2PQS6 291 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NRG2O14511 850 aaPredicted RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SSTR2P30874 369 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 RPS10P46783 165 aaKnown RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 BAMBIQ13145 260 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CEACAM7Q14002 265 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF74Q16587 644 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HNRNPA1L2Q32P51 320 aaKnown RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SSX7Q7RTT5 188 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MISPQ8IVT2 679 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GPR26Q8NDV2 337 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR8U1Q8NH10 309 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ERVMER34-1Q9H9K5 563 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC35D1Q9NTN3 355 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OSGIN2Q9Y236 505 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 RASD1Q9Y272 281 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TRGV8A0A0C4DH27 118 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 H0YGG7 62 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TMEM244Q5VVB8 128 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC6A19Q695T7 634 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 B3GNT7Q8NFL0 401 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PINX1Q96BK5 328 aaKnown RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC41A2Q96JW4 573 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NOL4LQ96MY1 436 aaPredicted RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 EPHX3Q9H6B9 360 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SPACA1Q9HBV2 294 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 KIF25Q9UIL4 384 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MYOGP15173 224 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 WDR5P61964 334 aaKnown RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 LTBQ06643 244 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 EXOSC2Q13868 293 aaKnown RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC6A18Q96N87 628 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 EGLN1Q9GZT9 426 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CHST11Q9NPF2 352 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MTCH1Q9NZJ7 389 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 J3KTA2 159 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 M6PRP20645 277 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MPEG1Q2M385 716 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SEC22AQ96IW7 307 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 KATNB1Q9BVA0 655 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 KLRC4-KLRK1H3BQV0 150 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FABP1P07148 127 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR5H8P0DN80 308 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF546Q86UE3 836 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 WFDC8Q8IUA0 241 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC7A5P1Q8MH63 180 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NHLRC2Q8NBF2 726 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TFAP2CQ92754 450 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 THAP7Q9BT49 309 aaPredicted RBP12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 LHPPQ9H008 270 aa12.3□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MROH6A6NGR9 719 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 C17orf112F2Z3M2 114 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 XRCC3O43542 346 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DNPH1O43598 174 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GPR137BO60478 399 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 C1orf105O95561 183 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TXNDC12O95881 172 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HTN1P15515 57 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 RGRP47804 291 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CPNE4Q96A23 557 aaPredicted RBP12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PRRT1Q99946 306 aa12.29□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SLC12A9Q9BXP2 914 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms