RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 OR6C65A6NJZ3 312 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 PCGF2P35227 344 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 IDH3GP51553 393 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-203ENST00000471344 GYS2P54840 703 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 RABL3Q5HYI8 236 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 ENTPD8Q5MY95 495 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 CLEC2AQ6UVW9 174 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 C10orf53Q8N6V4 93 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 ANKS4BQ8N8V4 417 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 MAGEE2Q8TD90 523 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-203ENST00000471344 SORCS2Q96PQ0 1159 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 MDFIQ99750 246 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 RHNO1Q9BSD3 238 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 KATNB1Q9BVA0 655 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 CA10Q9NS85 328 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 SELENONQ9NZV5 590 aa13.34□□□□□ -0.27
COL1A1-203ENST00000471344 LOC102725191A0A1B0GVB3 256 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 SLC35F4A4IF30 521 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 FXYD1O00168 92 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 KPNA4O00629 521 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-203ENST00000471344 PLPP3O14495 311 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 CD5LO43866 347 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 CRLF1O75462 422 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 IGKV3-15P01624 115 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 TNFRSF1BP20333 461 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 MDH1P40925 334 aaKnown RBP13.33□□□□□ -0.28
COL1A1-203ENST00000471344 SH3BGRP55822 239 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-203ENST00000471344 HGFACQ04756 655 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 PUDPQ08623 228 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 RBBP4Q09028 425 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 NPRL3Q12980 569 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 PMS2P3Q13401 168 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 CAMK2DQ13557 499 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 ADIPOQQ15848 244 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 LINC00114Q6XXX2 140 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 MDP1Q86V88 176 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 C20orf196Q8IYI0 205 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 PIK3C3Q8NEB9 887 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 BHLHE22Q8NFJ8 381 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-203ENST00000471344 OR6S1Q8NH40 331 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 TSPEARQ8WU66 669 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 EPYCQ99645 322 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 TMEM43Q9BTV4 400 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 ASPNQ9BXN1 380 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 MRPL39Q9NYK5 338 aaKnown RBP13.33□□□□□ -0.28
COL1A1-203ENST00000471344 CORINQ9Y5Q5 1042 aa13.33□□□□□ -0.28
COL1A1-203ENST00000471344 C11orf98E9PRG8 122 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 CHP2O43745 196 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 HLA-HP01893 362 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 CRYAAP02489 173 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 TP53P04637 393 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-203ENST00000471344 OR4A8P0C604 315 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 CAPZA2P47755 286 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 TRMT5Q32P41 509 aaKnown RBP13.32□□□□□ -0.28
COL1A1-203ENST00000471344 SWT1Q5T5J6 900 aaKnown RBP13.32□□□□□ -0.28
COL1A1-203ENST00000471344 METTL21CQ5VZV1 264 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 NANOGP8Q6NSW7 305 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 ZNF613Q6PF04 617 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 LRRC17Q8N6Y2 441 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 SCAIQ8N9R8 606 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 ADAMTS16Q8TE57 1224 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 C10orf105Q8TEF2 133 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 MS4A3Q96HJ5 214 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 ZNF317Q96PQ6 595 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-203ENST00000471344 KCNS3Q9BQ31 491 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 CCDC134Q9H6E4 229 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 EVA1AQ9H8M9 152 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 NANOGQ9H9S0 305 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 YAE1D1Q9NRH1 226 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 SLC7A7Q9UM01 511 aa13.32□□□□□ -0.28
COL1A1-203ENST00000471344 YLPM1P49750 1951 aaKnown RBP13.32□□□□□ -0.28
COL1A1-203ENST00000471344 ATRQ13535 2644 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 IGHV2OR16-5A0A0B4J2B6 119 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 ZNF99A8MXY4 864 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-203ENST00000471344 FMO6PO60774 539 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 SHOX2O60902 331 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-203ENST00000471344 CH25HO95992 272 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 B4GALT1P15291 398 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 CBR1P16152 277 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 AHCYP23526 432 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 SERPINF1P36955 418 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 EFNA4P52798 201 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 CHRNB3Q05901 458 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 MFSD13AQ14CX5 517 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 VMACQ2NL98 169 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 TMEM249Q2WGJ8 235 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 REP15Q6BDI9 236 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 ANKK1Q8NFD2 765 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 OR5J2Q8NH18 312 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 FAM168AQ92567 244 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 ZNF224Q9NZL3 707 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 MXRA5Q9NR99 2828 aa13.31□□□□□ -0.28
COL1A1-203ENST00000471344 DYNC1I1O14576 645 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 AKAP8O43823 692 aaKnown RBP13.3□□□□□ -0.28
COL1A1-203ENST00000471344 C8BP07358 591 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 VIMP08670 466 aaKnown RBP13.3□□□□□ -0.28
COL1A1-203ENST00000471344 ADORA3P0DMS8 318 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 IFNGR1P15260 489 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 THBS4P35443 961 aa13.3□□□□□ -0.28
COL1A1-203ENST00000471344 BIDP55957 195 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms